Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00771 ATGCTGTGTTTGAAAACACACCTCTCTTTTCCATTCCGCACCCCTTCATCACCATCCTCAAAACACCTCACACACCACCTCCGTTTCTCGCCGTTCAGATCCACAATCAAGATGTCATCATCAACCTAAACCAAAACCAAAGCCATCGAACACATCGTCCTCTTCAAAGTCAAAGAAAACACCGAACCCTCCAAAGTAACCTCCATGGTTAACGGCCTCAGTTCCCTCATCTCCCTAGATCAAGTCCTGCATCTCACCGTAGGCCCTCTCCTACGCAACCGCTCCACCGCGTTAACGTTCACTCACATGCTTCACAGTCGGTACAAATCCAAAGAAGATCTCGAAGCCTACTCTGCGCATCCAAGCCATCTTGGAGTCGTTAGAGGAAGCGTTCTTCCGATTATTGATGATCTAATGGCGGTGGATTGGGTGGCGGAGGATGTTGACGGTGGTGAATTGGTTCCGAGTCCTGGATCGGCGATTCGTCTGACGCTTTTGAAGTTGAAGGAGGGGGCTGTTAGCGATGAGGTTGTGGAGGTTATTAAGGGAATTCCGGAGAGTTTTAAGCAGATTAAGGAACTGACTTGCGGAGAGAATTTCTCGCCGGCGAGGGCGAAGGGTTTCTCGGTTGCTTCGCTTGCTGTGTTTCCGGGGGAGAGGGAATTGGAGGAAGTTGATTCGAATAAGGAGCTGGTGGAGTATCAGAAGGAGAAGGTTAGAGATCGTGTGGAGAGTGTGGTGGTGGTTGATTATGTTGTGCCGCCGCCGCCGCCACCGCAATCGGCGAGTCTTTGA 795 0.5082 MLCLKTHLSFPFRTPSSPSSKHLTHHLRFSPFRSTIKMSSSTXTKTKAIEHIVLFKVKENTEPSKVTSMVNGLSSLISLDQVLHLTVGPLLRNRSTALTFTHMLHSRYKSKEDLEAYSAHPSHLGVVRGSVLPIIDDLMAVDWVAEDVDGGELVPSPGSAIRLTLLKLKEGAVSDEVVEVIKGIPESFKQIKELTCGENFSPARAKGFSVASLAVFPGERELEEVDSNKELVEYQKEKVRDRVESVVVVDYVVPPPPPPQSASL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00771 264 Gene3D - 40 148 - -
Vivi1g00771 264 Pfam Stress responsive A/B Barrel Domain 49 144 IPR013097 -
Vivi1g00771 264 Pfam Stress responsive A/B Barrel Domain 162 253 IPR013097 -
Vivi1g00771 264 SUPERFAMILY Dimeric alpha+beta barrel 48 149 IPR011008 -
Vivi1g00771 264 PANTHER - 46 255 IPR044662 -
Vivi1g00771 264 SUPERFAMILY Dimeric alpha+beta barrel 160 256 IPR011008 -
Vivi1g00771 264 Gene3D - 160 255 - -
Vivi1g00771 264 ProSiteProfiles Stress-response A/B barrel domain profile. 160 251 IPR013097 -
Vivi1g00771 264 ProSiteProfiles Stress-response A/B barrel domain profile. 49 143 IPR013097 -
Vivi1g00771 264 SMART Dabb_2 160 253 IPR013097 -
Vivi1g00771 264 SMART Dabb_2 49 145 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00771 Vivi-Chr1 16586873 16587885 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00771 - - mtr:25494185 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00771 1 16586873 16587885 Vivi1g00771 1 16586873 16587885 ECH
Vivi1g00771 1 16586873 16587885 Vivi4g02087 4 102039991 102040578 PCT