Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02072 ATGTCTGGAGTTGCAAAGGAGGAAGAGTCGGGTTGGGGTGCTTCGTTTTTTATGCAGACAACGGAAGATGTGGCTAAAGCTGTTTCTGCTGCTATGAATACTCCACGGCCTTCTGTTATTTATTCGTCGAAAAATGAACAGGGTGGTAGTCAACTTCAAAGGCTGCAGTATCAAGTTACGAAGATGATAAAAGGCTTTTCTCGCCCTCCTGAAGTTAAATATGCGAATTATAATCCGGAAATCTTGACGAGTCAGAAGAGGCAATGGGCTGCCAACTTTCATTTGCAGTACAATGATCATAAGTCTTGGAAGGAGCCAACGAAGTTGTTTGAAAGTATGGTGGTTGTTGGACTTCATCCTAATTCTGACATTCAGGCGCTGCAAAGGCAATATTTGGTGAGGAGGTCTGAAGGCTCTGGTAAATTGAGAAGTGCACTTGGTTATCAAAATCAATCCCGTGTGGAGCCTAATGTTGAACCTCAGGTCTTATTTGTTTATCCTCCAGAAAAGCAGCTACCTCTTAAAGAAAAAGATCTTCTTTCTTTCTGTTTCCCTGGAGGTCTCGAGGTTAATGCTGTTGAGAAAACCCCTTCCATGAGTGAATTAAACGAAATTCATTTCGGGCAGGAACATTTTAAACAAAGGGATCTGTCATTTGTGTTTAGGTTACAGGGTGCTGATAATTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAGCTAGTGCATAAACCCTCTGGATTGCTTTCTATGGTTCCGGACAAGCAGGCGGCATCCAACTCTTCCTTGAGACGCCATATATTAACCACACAAAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAGTTGCATTTTGGTGTATTGAACAGCATCTTCATGCAAGAAAGGCTGGAGCGCTTGACAAGAAGCGTTGAGTATTTTAATGAGTTTCCCGAAGGTAGTTATGAGGGAGAAAACTTGGAAGGAAATTCAGAGCGTCTTGTGGTGAATGATAGGCTTACCGAAGACAAACTTGATGAGAATCCAAGAATTTCTCAATCAAACCTAAATAATTCCCAACCCAAAAACTTCGAGGATGATAGTAATCATCAAGAGAAACAAATGGTAAATGAGGAGATGCATACACTTGAGGAGGGAGCAGATGATGATAATATTGTACCTATTCATCCTGAAACTGATGGAGAAATTGTCAAAGAAATGTCTGGCCTTACAATTGCTGAAGATAGTAATACGTATGGCAATGCCTTGGCAACAAACAAACAGTCAGAAGATAGGCGTTTACCAAATGCTATTTTGCCCCTCCTTCGGTATAGCCAGTATGAAAGCTCCGAATCTTCCTGCAGTTTTCAAGGTTCACCTTGTGAAGATAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCAGTCTCGGGACAAGAAGATTTAAATGACCTACATGAAATTCTTGAGTGGGCCAAGGCTAATAATTGTGGACCCTTACAAATTATAAGTGAGTATTATCGTTTTAGTTGTCCTACAAGGGGATCGACACTTATCTTTCATCCTTTGGAGCACCTTCATTCCTTGGAATATCACAGGCCTGATGAGAACGCTCTTTATCTGTCTGGTTCACTTATTGGTTTGAAATCCTGTAGTACGGGTCTGGGATTAGCCGAGGCACAAAATTGTCTTCTGGTTGCAGAGGAGGCAACTGCATTATCTATATGGGCTGTAGCGTGCTTATGTGGTACCTTGAGACTTGAACATGTGTTAACATTCTTTGCTGGAGCTCTATTGGAGAAGCAGATTGTAGTTGTCTGTTCTAATTTGGGAATCCTATCTGCGTCGATTCTATCAGTTATTCCATTAATTCGACCCTATCAATGGCAAAGCCTGCTAATGCCGGTTTTACCAAATGACATGCTTGATTTTCTGGACGCTCCTGTCCCTTACATAGTTGGTGTTAGGCACAAGACAAATGAAGTTCAGTCAAAGTTAACCAATGTTATTCTGGTTGATGCCAACAGAAACCAGGTGAAGTCACCGTCACTACCTCAACTGCCAAGACAGAAAGAGCTAATGTCTTCTTTACGTCCTTATCATGCGACTCTTGTAGGAGAAAGTTACTTGGGTAGGAGAAGGCCGGTGTATGAATGTACGGAAATGCAGGTAGAAGCTGCCAAGGGATTCTTATCCGTGTTAAGATCTTATTTGGATTCCCTTTGCTATAACATCCGTTCACATACAATAACCAATGTACAATCGAATGATGATAAGGTATCCTTGCTTTTGAGGGAAAGTTTCATTGACTCATTCCCTTATCGCGAGCAGTCTTTCATGAAGCTTTTCGTGGATACACAACTCTTCTCTGTACACACAGATCTTGTGCTCTCTTTCTTCCAAAAGGAATAG 2409 0.4147 MSGVAKEEESGWGASFFMQTTEDVAKAVSAAMNTPRPSVIYSSKNEQGGSQLQRLQYQVTKMIKGFSRPPEVKYANYNPEILTSQKRQWAANFHLQYNDHKSWKEPTKLFESMVVVGLHPNSDIQALQRQYLVRRSEGSGKLRSALGYQNQSRVEPNVEPQVLFVYPPEKQLPLKEKDLLSFCFPGGLEVNAVEKTPSMSELNEIHFGQEHFKQRDLSFVFRLQGADNSTLYGCCVLVEELVHKPSGLLSMVPDKQAASNSSLRRHILTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLTRSVEYFNEFPEGSYEGENLEGNSERLVVNDRLTEDKLDENPRISQSNLNNSQPKNFEDDSNHQEKQMVNEEMHTLEEGADDDNIVPIHPETDGEIVKEMSGLTIAEDSNTYGNALATNKQSEDRRLPNAILPLLRYSQYESSESSCSFQGSPCEDRNFRSDADDTETEDASVSGQEDLNDLHEILEWAKANNCGPLQIISEYYRFSCPTRGSTLIFHPLEHLHSLEYHRPDENALYLSGSLIGLKSCSTGLGLAEAQNCLLVAEEATALSIWAVACLCGTLRLEHVLTFFAGALLEKQIVVVCSNLGILSASILSVIPLIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVRHKTNEVQSKLTNVILVDANRNQVKSPSLPQLPRQKELMSSLRPYHATLVGESYLGRRRPVYECTEMQVEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLRESFIDSFPYREQSFMKLFVDTQLFSVHTDLVLSFFQKE 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02072 802 Gene3D - 99 314 - -
Vivi4g02072 802 MobiDBLite consensus disorder prediction 337 367 - -
Vivi4g02072 802 Pfam DENN (AEX-3) domain 565 674 IPR001194 -
Vivi4g02072 802 MobiDBLite consensus disorder prediction 345 359 - -
Vivi4g02072 802 ProSiteProfiles Tripartite DENN domain profile. 144 802 IPR037516 -
Vivi4g02072 802 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 38 798 - -
Vivi4g02072 802 SMART DENN_cls 269 676 IPR001194 -
Vivi4g02072 802 MobiDBLite consensus disorder prediction 446 478 - -
Vivi4g02072 802 Gene3D - 573 739 IPR043153 -
Vivi4g02072 802 SMART uDENN_cls 106 239 IPR005113 -
Vivi4g02072 802 Pfam uDENN domain 160 237 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02072 Vivi-Chr4 100315107 100327686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02072 - - gmx:100782148 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02072 4 100315107 100327686 Vivi4g02072 4 100315107 100327686 ECH
Vivi1g00780 1 16859415 16866207 Vivi4g02072 4 100315107 100327686 PCT