Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00780 ATGACTGGAATGGAAAAAGAACAAGATGTTCCTAGAACTGATGTTAATTCTGTGATGCATTCATCAAAAGATGGTAACAATGGTAGCCAATTTCAAAGGCTGCAATATCAAGTTACTAAATTGTTCAAAGGGTTTTCAAGTCCACCTGATGTTGAAAATGAAAACAAAACTTACAATCCGGAGATTTTGACTAGTCTTAAACGTCAATGGGCTGCAAATTTTCAGTTGAAGTACATGGGTCATAGGTCTTTCAAGAAGCCCTCACAACTGTTTGAGAGTATAGTGGTTGTTGGACTTCACCCGAATTGTGATGTTCAGACACTACATAGACAGTTTGTTGATAAGAAATTTGAAGAATCTGCTAAATTGAGAAGTGCACTTGGTTGTCAGAATCAATCTCTTGTAGAACCCAATATTGAACCTCAGGTCTTGTTTGTTTATCCTCCAGAAAAACCTCTGCCTCTTAAATGCAAGGATCTTCTTTCTTTCTGTTTCCCTGGAGGCTTGGAGGTTCGAGCTGTTGAGAGAACCCCTTCCATGAGTGCGTTGAATGAAATTTTTTACGGGCAGGAACACCTTAAACAAATGGATCTTTCATTTGTATTCAGATTACAGGGTTCTGACAATTCAACGCTTTACGGGTGTTGTGTTTTGGTTGAAGAACTAGTGCAAAAGCCCTCTGGATTGTTGTCTCTGATTTCTGACAAGCAACCGTCTTACTCTTCTTTAAGACGTTATGTATTAACCACTCAGAGATGTTACTGCATCCTTTCAAGGCTTCCATTTTTCGAACTGCACTTTGGTGTATTAAATAGCATCTTCACTCAAGAAAGGTTAGAGAAGTTGACGAAAAGTGTTGAAGATTCAAATTTAGAATTTGTTGAAGGAAGCTATGATGAAGAAAACTCAGAGGGAAATTCAGAAAATATGTTGGTGAGCGATGGAATTATAGAACAAAGCTTTCATGAAAATTCATTGATTTCGCAATCAAGAGTAAGAGCATCTACGCCTGAAAACATTGTTGGTGGTGGTCACCCGGAGATCCTAATGGTTGACGGAGAGCCGCAGTCATATAAGGAGAGAACCGATTATGACAGTATTGTGCCTACTAAGCGTGAAACTGATAGGATAACAACCAAAGTAGAATCTGGTCCTGCGATTTCTAAATATAGTGATGATCACCCAGAGAACCCAATAGTTGATGGAGAGCTGCAGGGGAAAATCGATAATGACAGCGCTATGCCTACTGAGCACGAAACTGATACGACAGCAGTCAAAGAAAAATCTGACCCTATAACATGTGAAGATAGTGATGATTATCCGGAGAACCTTATGGTTGATGGAGAGCTTCAGTCTTATAAGGAGAGAATTGGTTATGACAGTGTTGTGCCTACTGAGCATGAAATTGATAGGACAGAAGTCAAAGAAGAATCTGCCTCTACAACTTTTGAAGATAATGATGATCTCCCTCCGAACCTAATAGTTGACGAAGAGCTGCAGTCTAATGAGAGAATCAATTATGACAGTGTTGTGCCTACTGAGCATGAAAATGATAGTGCAGCAGCTGAAAAAGAGTTTGATCCTAAAATTTCGGAAGATGGTGATGGTCACCCAGAGATATTGGTTGATGGAGATCTGCAGTCTGATAAGGAGAGAATCGATTATGAGGTTGTGCTCACCGAACATGAAACTGATCGGAAAACAGCCAAAGAAGAATCTGGCCCTACAATAACTGAAGATAGTGATCAGTATGGAGATGCTTTTGCAACCAATAAGGAATTAGAAGATAGTAATTTACGCAATGCTATTTTGCCCCTCCTGCATTCTTGCCAGTATGAAAGCTCTGAATCATCCTGCAGTTTTCAAGGCTCACCTTGTGAAGACAGAAATTTCAGGAGGGACATCGATGATAATGAGACTGAAGATGCATCTTTTTCTGGCCAAGAGAAGTTAAATGACTTAAATGATATTCTCGAATGGGCCGTGGAAAATAATCATGGACCACTACAAATTATATGCGAATACTACCGGCTAAATTGTCCTGCCAAGGGTTCTGCACTTACATTTCATCCTTTGGAGCACCTGCATCCGTTGGAATATCAAAGACCATCCGAAACAGTACTATGTCGTACTGGTTCAATATTTGAGTTGAAAAGTTGCAGTACCGGTCCGGAGTTAGCTGATGCACATAACACTCCCGCGGTAGAAGAGGCAACTTCGTTATCTGTATGGACTATAGCTTGCTTATGCGGTACCTTAAGACTTGAAAATGTATTAACATTCTTAGCAGGAGTTCTGCTGGAAAAGCAGATAATTGTTGCCTGTTCTAATTTGGGAGTCCTATCCGCTTCAGTTTTATCAGTTATTCCGCTAATCCAGCCCTACCGATGGCAAAGCCTGCTAATGACGGTTTTACCAAATGACATGCTTGATTTTTTAGACGCACCTGTCCCTTATATAGTTGGTATCAAGAACAAGATCAGTGAAGTCCAGTCAAAGTTTACCAATGTTATTGTGGTTGATGCCAACAGAAACCAGGTGAAGTCGCCAACGATACCGCAACTGCCAAGACAGAAAGAGCTAATATCTTCTTTACGTCCTTATCACGACACTCTTGTAGGAGAAAGTTACTTAGGAAAGAGAAGGCCAGTGTACGATTGCACAGAATCGCAGATTGGAGCTGCCAAGGGTTTCCTTTCGGTGCTGCGTTCTTATCTGGATTCTCTTTGCTATAACATCCGTTCTCACACAATTACCAATGTACAATCAAACGACGATAAGGTATCTTTGCTTTTGAAAGAGAGTTTCATCGGCTCATTCTCATATCGCGATCAGCCTTTCATGAAGCTTTTCGTCGATACACAGCTTTTTTCTGTACATACAGACATTATGCTCTCTTCGTTACAAAACGAATAG 2916 0.404 MTGMEKEQDVPRTDVNSVMHSSKDGNNGSQFQRLQYQVTKLFKGFSSPPDVENENKTYNPEILTSLKRQWAANFQLKYMGHRSFKKPSQLFESIVVVGLHPNCDVQTLHRQFVDKKFEESAKLRSALGCQNQSLVEPNIEPQVLFVYPPEKPLPLKCKDLLSFCFPGGLEVRAVERTPSMSALNEIFYGQEHLKQMDLSFVFRLQGSDNSTLYGCCVLVEELVQKPSGLLSLISDKQPSYSSLRRYVLTTQRCYCILSRLPFFELHFGVLNSIFTQERLEKLTKSVEDSNLEFVEGSYDEENSEGNSENMLVSDGIIEQSFHENSLISQSRVRASTPENIVGGGHPEILMVDGEPQSYKERTDYDSIVPTKRETDRITTKVESGPAISKYSDDHPENPIVDGELQGKIDNDSAMPTEHETDTTAVKEKSDPITCEDSDDYPENLMVDGELQSYKERIGYDSVVPTEHEIDRTEVKEESASTTFEDNDDLPPNLIVDEELQSNERINYDSVVPTEHENDSAAAEKEFDPKISEDGDGHPEILVDGDLQSDKERIDYEVVLTEHETDRKTAKEESGPTITEDSDQYGDAFATNKELEDSNLRNAILPLLHSCQYESSESSCSFQGSPCEDRNFRRDIDDNETEDASFSGQEKLNDLNDILEWAVENNHGPLQIICEYYRLNCPAKGSALTFHPLEHLHPLEYQRPSETVLCRTGSIFELKSCSTGPELADAHNTPAVEEATSLSVWTIACLCGTLRLENVLTFLAGVLLEKQIIVACSNLGVLSASVLSVIPLIQPYRWQSLLMTVLPNDMLDFLDAPVPYIVGIKNKISEVQSKFTNVIVVDANRNQVKSPTIPQLPRQKELISSLRPYHDTLVGESYLGKRRPVYDCTESQIGAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIGSFSYRDQPFMKLFVDTQLFSVHTDIMLSSLQNE 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00780 971 Gene3D - 741 907 IPR043153 -
Vivi1g00780 971 MobiDBLite consensus disorder prediction 372 399 - -
Vivi1g00780 971 MobiDBLite consensus disorder prediction 562 577 - -
Vivi1g00780 971 MobiDBLite consensus disorder prediction 14 30 - -
Vivi1g00780 971 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 21 961 - -
Vivi1g00780 971 MobiDBLite consensus disorder prediction 471 491 - -
Vivi1g00780 971 MobiDBLite consensus disorder prediction 562 583 - -
Vivi1g00780 971 Pfam DENN (AEX-3) domain 742 843 IPR001194 -
Vivi1g00780 971 SMART DENN_cls 249 845 IPR001194 -
Vivi1g00780 971 Pfam uDENN domain 141 218 IPR005113 -
Vivi1g00780 971 MobiDBLite consensus disorder prediction 1 30 - -
Vivi1g00780 971 Gene3D - 78 291 - -
Vivi1g00780 971 ProSiteProfiles Tripartite DENN domain profile. 562 971 IPR037516 -
Vivi1g00780 971 SMART uDENN_cls 87 220 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00780 Vivi-Chr1 16859415 16866207 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00780 - - mtr:25494181 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00780 1 16859415 16866207 Vivi1g00780 1 16859415 16866207 ECH
Vivi1g00780 1 16859415 16866207 Vivi4g02072 4 100315107 100327686 PCT