Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01919 ATGGCGAGTCTCACCCGTTCCACCTCACTCCGTGAGAGGTTTGATGAAACTCTCACTGCTCACAGGAACGAAATTCTAGCTCTTCTGTCAAGGATTGAAGCAAAGGGAAAGGGAATTCTTCAACATCATCAGATCATTGCCGAGTTTGAAGAAATTCCTGAGGAGAATAAGCAGAAGCTTGTTAACGGAGCCTTTGGACAAATTTTGAGATCTACTCAGGAAGCTATAGTGTTAGCACCATTTGTTGCACTTGCTGTTCGTCCAAGGCCTGGTGTTTGGGAGTATCTGAGAGTCGACGTGCATCGTCTTATTGTCGATGAATTGAGTGCTGCTGAGTATCTCAAGTTCAAGGAGGAGCTTGTTGAAGGAAGTTCTAATGGGAACTTTGTGCTTGAGTTGGACTTTGAACCATTCAATGCGTCGATTCCGAAACCAACGCAGAACAAGTCGATTGGAAATGGCGTTGAGTTTCTCAATCGCCATCTTTCTGCTAAGCTTTTCCATGGCAAAGAAAGTTTGCAGCCACTTCTGGAGTTTCTTAGGCTTCATAACTATAATGGAAAGAATATTATGGTTAATGACAGAATTCAGAATCTGAATTCTCTTCAATATGTATTGCGAAAAGCTGAGGATTATCTGATCAAAATTGCTCCTGAAACACGGTACTCGGAGTTTGAACTCGAATTCCAGGATATTGGTTTGGAGAGAGGGTGGGGAGACACTGCTGAGCGTGTCGTTGAAACGATCCAACTTCTGTTGGACCTTCTCGACGCACCTGATCCTCACACCCTCGAGAAATTCCTTGGAAGAATCCCTATGGTTTTTAATGTTGTCATCCTTTCGCCACATGGCTATTTTGCCCAAGATAATGTCTTAGGATACCCCGATACCGGTGGACAGATTGTGTACATCTTGGACCAAGTTCGTGCCTTGGAGGAAGAGATGCTCAAACGCATCAAGCAACAAGGGTTGGATATCACACCTCGCATTCTCATTATCACCCGTCTTCTCCCCGATGCAGTGGGAACTACTTGTGGTCAACGTCTTGAGAAGGTATACAATACCGAGCATTGCCACATTCTTCGAGTTCCGTTTAGAACCGAAAAGGGAATTGTTCGCAAATGGATCTCAAGATTTGAAGTCTGGCCCTACCTAGAGACTTTCAGCGAGGATGTCGCCAATGAACTTGCCAAAGAGTTGCAAGGCAAGCCTGATCTGATTGTCGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTAGCACATAAATTAGGCGTAACACAGTGTACTATTGCTCATGCACTCGAGAAGACCAAGTATCCCGACTCTGACCTTTATTGGAAAAAATTTGATGACAAATATCACTTCTCGTCCCAATTTACCGCTGATCTTTTTGCAATGAACCACACAGACTTTATCATCACAAGTACCTTCCAAGAGATTGCCGGAAGCAAGGATACTGTTGGGCAGTATGAGAGTCACACACACTTTACTCTTCCCGGGCTTTACCGTGTTGTTCACGGTATCAATGTCTTTGATCCAAAGTTCAACATTGTCTCTCCCGGAGCTGATTTGAGCATTTACTTCCCATATACTGAAACCGAGCGTAGATTGACATCATTCCACCCTGATATTGAAGAACTTCTCTACAGCTCAGTGGAGAATGAGGAACACATATGTGTACTGAAGGATCGCAGCAAGCCAATTATCTTCACGATGGCAAGGTTGGACCGAGTAAAAAACATTACTGGACTTGTTGAGTGGTATGGCAAGAATGCTCGCCTAAGGGAGTTGGTAAACCTTGTCGTTGTTGCCGGAGACAGAAGGAAGGAGTCCAAGGATTTAGAAGAGATAGCTGAGATGAAGAAAATGTACGGCCTGATCGAAACCTACAAACTGAACGGACAATTCAGATGGATTTCTGCCCAAATGGACCGAATTAGAAATGGAGAGCTTTACCGTGTCATCTGTGACACAAAGGGTGCTTTCGTGCAGCCAGCTATTTATGAAGCTTTTGGTTTAACTGTCATTGAAGCTATGACTTGTGGATTGCCAACATTTGCTACATGTAATGGTGGTCCTGCTGAGATCATTGTTCATGGAAAATCTGGTTACCATATTGATCCTTATCATGGTGACCGCGCTGCTGACACTCTTGTCGAATTCTTTGAGAAGAGTAAGGCTGATCCTTCTTTTTGGGACAAAATCTCTCATGGAGGTCTCAAACGTATTCATGAGAAGTACACATGGCAGATTTATTCTGACAGGCTTTTGACTCTTACTGGTGTGTATGGCTTCTGGAAGCATGTGACAAATCTTGATCGCCGTGAGAGCAAACGCTACCTTGAGATGTTTTATGCACTCAAATACAGCCAATTGGCTCAATCTGTGCCTCTTGCTGTTGAAGAGTAA 2415 0.4389 MASLTRSTSLRERFDETLTAHRNEILALLSRIEAKGKGILQHHQIIAEFEEIPEENKQKLVNGAFGQILRSTQEAIVLAPFVALAVRPRPGVWEYLRVDVHRLIVDELSAAEYLKFKEELVEGSSNGNFVLELDFEPFNASIPKPTQNKSIGNGVEFLNRHLSAKLFHGKESLQPLLEFLRLHNYNGKNIMVNDRIQNLNSLQYVLRKAEDYLIKIAPETRYSEFELEFQDIGLERGWGDTAERVVETIQLLLDLLDAPDPHTLEKFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQIVYILDQVRALEEEMLKRIKQQGLDITPRILIITRLLPDAVGTTCGQRLEKVYNTEHCHILRVPFRTEKGIVRKWISRFEVWPYLETFSEDVANELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDLYWKKFDDKYHFSSQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTHFTLPGLYRVVHGINVFDPKFNIVSPGADLSIYFPYTETERRLTSFHPDIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEIAEMKKMYGLIETYKLNGQFRWISAQMDRIRNGELYRVICDTKGAFVQPAIYEAFGLTVIEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPYHGDRAADTLVEFFEKSKADPSFWDKISHGGLKRIHEKYTWQIYSDRLLTLTGVYGFWKHVTNLDRRESKRYLEMFYALKYSQLAQSVPLAVEE 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01919 804 FunFam Sucrose synthase 144 273 - -
Vivi4g01919 804 Pfam Glycosyl transferases group 1 562 728 IPR001296 GO:0016757
Vivi4g01919 804 Gene3D Glycogen Phosphorylase B; 525 751 - -
Vivi4g01919 804 FunFam Sucrose synthase 9 143 - -
Vivi4g01919 804 NCBIfam sucrose synthase 22 800 IPR012820 GO:0005985|GO:0016157
Vivi4g01919 804 Gene3D - 23 143 - -
Vivi4g01919 804 FunFam Sucrose synthase 278 543 - -
Vivi4g01919 804 Pfam Sucrose synthase 6 551 IPR000368 GO:0005985|GO:0016157
Vivi4g01919 804 Gene3D Glycogen Phosphorylase B; 278 793 - -
Vivi4g01919 804 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 293 761 - -
Vivi4g01919 804 Gene3D - 144 273 - -
Vivi4g01919 804 PANTHER - 5 802 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01919 Vivi-Chr4 89316606 89324320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01919 4 804 Glycosyltransferase AT3G43190 81.898 0.0 1390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01919 K00695 - gmx:100819730 1443.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01919 4 89316606 89324320 Vivi4g01919 4 89316606 89324320 ECH
Vivi1g00841 1 18023306 18028048 Vivi4g01919 4 89316606 89324320 PCT