Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00841 ATGGCTACTGAGCGATTGACTCGTGTTCATAGTCTGCGTGAGAGGCTTGATGAAACCTTGACTGCTAATAGGAATGAAATTTTAGCTCTTCTTTCAAGGCTTGAAGCAAAGGGAAAGGGAATTTTGCAGCATCACCAAGTGATTGCTGAGTTTGAAGAAATTCCTGAAGAGAATAGACAGAAGCTCACTGATGGTGCATTTGGTGAAGTTCTTAGATCCACACAGGAAGCTATTGTTTTGCCACCATGGGTTGCACTTGCTGTTCGTCCAAGGCCAGGTGTTTGGGAGTATCTGAGAGTGAATGTGCATGCTCTTGTTGTTGAAAATTTGACACCTGCTGAGTTTCTCAAGTTCAAGGAAGAACTTGTTGATGGAAGTGCTAATGGTAACTTTGTGCTTGAATTGGACTTTGAACCGTTTACTGCGTCTTTCCCTCGTCCTACTCTCAACAAGTCAATTGGAAATGGTGTGCAGTTTCTCAACCGTCACCTTTCTGCTAAGCTCTTCCATGACAAGGAAAGTTTGCATCCACTTTTGGAGTTTCTCAGACTTCACAGCTACAAGGGAAAGACATTGATGTTGAATGACAGAATTCAAAACCCTGATTCTCTTCAACATGTTCTGAGGAAAGCTGAAGAGTATCTAAGCACAGTTGCTCCTGAAACACCGTACTCTGAATTCGAACACAGGTTCCAGGAAATTGGTTTGGAGAGAGGTTGGGGAGACAGCGCAGAGCGTGTGCTCGAGTCCATTCAGCTTCTCTTGGATCTTCTTGAGGCTCCTGATCCTTGCACCCTTGAGACTTTCCTTGACAGAATCCCTATGGTGTTTAATGTTGTCATTCTTTCTCCTCATGGTTACTTTGCTCAAGATGATGTTTTGGGATACCCCGATACCGGTGGTCAGGTTGTTTACATTTTGGATCAAGTTCGTGCCCTGGAGAGCGAGATGCTCAAACGAATTAAGAAACAAGGCTTGGATATCGTTCCTCGCATTCTCATTATCACTCGTCTTCTCCCCGATGCAGTTGGAACTACTTGTGGCCAACGACTCGAGAAGGTCTATGGAACCGAGCACTGTCACATTCTTCGAGTTCCCTTCAGAGATCAGAAGGGAATTGTTCGCAAGTGGATCTCACGTTTCGAAGTCTGGCCATATCTAGAAACTTACACTGAGGATGTTGCTCATGAGCTTGCTAAAGAGTTACAAGGCAAACCAGATCTAATTGTTGGAAACTACAGTGATGGAAACATTGTTGCTTCCTTGTTGGCACATAAACTTGGTGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAGTACCCTGAATCTGATATTTACTGGAAAAAATTTGAAGAGAAGTATCACTTCTCCTGCCAATTTACCGCTGATCTTTTTGCAATGAACCACACAGATTTCATCATCACAAGTACCTTCCAAGAGATTGCTGGAAGCAAGGATACTGTTGGACAGTATGAGAGCCACACTGCCTTCACTCTTCCAGGACTCTACCGTGTTGTGCACGGCATTGATGTCTTTGATCCTAAGTTCAACATAGTATCTCCAGGAGCTGATCAGACCATTTACTTCCCTTACACCGAAACTAGCCGCAGGTTGACATCATTCTACCCTGAAATTGAAGAGCTTCTTTACAGCACAGTGGAAAATGAAGAGCACATATGTGTGCTCAAGGACCGCAGCAAGCCTATTATCTTCACCATGGCAAGGTTGGACCGTGTGAAGAACATTACAGGACTAGTTGAATGGTACGGAAAGAACGCCAAGCTTCGTGAGTTGGTGAACCTTGTCGTTGTTGCCGGAGACAGGAGGAAGGAGTCAAAGGACTTGGAAGAGAAAGCTGAGATGAAGAAGATGTATGAACTAATCGAGACCTACAAGTTGAACGGCCAATTCAGATGGATTTCATCTCAGATGAACCGTGTCAGAAACGGAGAGCTCTACCGTGTAATCTGTGACACAAAAGGAGCTTTCGTGCAGCCTGCTGTGTACGAAGCCTTCGGTCTTACAGTCGTTGAGGCCATGGCTACCGGATTACCAACATTCGCAACACTCAATGGTGGACCTGCTGAGATCATTGTCCATGGAAAATCTGGATTCCACATTGATCCATACCATGGCGAACGTGCTGCTGATCTCCTCGTCGAATTCTTCGAGAAAGTTAAGGCTGACCCATCTCACTGGGACAAGATCTCTCATGGTGGTCTCCAACGTATTGAAGAGAAGTACACATGGCAAATTTACTCTCAGAGGCTTCTTACACTCACTGGTGTCTATGGTTTCTGGAAACATGTTTCTAACCTGGACCGCCTCGAGAGCCGCCGTTATCTCGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTAGCTGTTGAGGAGTGA 2421 0.4523 MATERLTRVHSLRERLDETLTANRNEILALLSRLEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENLTPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQNPDSLQHVLRKAEEYLSTVAPETPYSEFEHRFQEIGLERGWGDSAERVLESIQLLLDLLEAPDPCTLETFLDRIPMVFNVVILSPHGYFAQDDVLGYPDTGGQVVYILDQVRALESEMLKRIKKQGLDIVPRILIITRLLPDAVGTTCGQRLEKVYGTEHCHILRVPFRDQKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFYPEIEELLYSTVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYELIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGERAADLLVEFFEKVKADPSHWDKISHGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00841 806 Gene3D Glycogen Phosphorylase B; 280 796 - -
Vivi1g00841 806 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Vivi1g00841 806 Gene3D - 146 275 - -
Vivi1g00841 806 PANTHER - 7 804 IPR012820 GO:0005985|GO:0016157
Vivi1g00841 806 FunFam Sucrose synthase 146 275 - -
Vivi1g00841 806 FunFam Sucrose synthase 11 145 - -
Vivi1g00841 806 Gene3D Glycogen Phosphorylase B; 527 753 - -
Vivi1g00841 806 FunFam Sucrose synthase 280 560 - -
Vivi1g00841 806 Pfam Glycosyl transferases group 1 564 728 IPR001296 GO:0016757
Vivi1g00841 806 NCBIfam sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Vivi1g00841 806 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Vivi1g00841 806 Gene3D - 25 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00841 Vivi-Chr1 18023306 18028048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00841 6 806 Glycosyltransferase AT3G43190 84.270 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00841 K00695 - gmx:547508 1538.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00841 1 18023306 18028048 Vivi1g00841 1 18023306 18028048 ECH
Vivi1g00841 1 18023306 18028048 Vivi4g01919 4 89316606 89324320 PCT