Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01747 ATGCCGCGTCGGGCTGCCGAGTTTCGGCGCCCGATTCGACGGAAGTTGTCTTATGGGATCTGCTTTCTTCTTGGAGCGTTTTCCGTTGTCGGTTTGGTTTTGCTTTTTCTTCAACATAGTTACCATGAAGATCGGGTCAAACATCCTCTTCTGGAGGGAAACAAACATGTAGAGCATTTTGCTAAGGATAGATTGAATTTTACCGAAGAAATTTCAAGTGCGACATCTTTTTCAAGGCAATTAGCAGAGGAAATGGTTCTTGCCAAAGCTTATGTGGTTATAGCCAAAGAACACAATAATCTTCATCTAGCATGGGAGCTAAGCTTAAAGATTAGAAGTTGCCAGCTTTTGCTGTCGAAAGCTGCCATGGCCGGAAGGCCTGTCACGAAGGAGGAAGCCGAACCGATAATTAAAAGCCTATCTTCTTTAATTTTCAAGGCACAAGACATCCATTATGACATTGCAACCACTATAGTTACAATGAAATCGCATATTCAAGCTCTTGAAGAGCGAGCGATTGCAGCGTCAGTTCAAAGCAATGTGTTTGCTCAAATATCGGCCGAAGCATTACCGAAGAGTCTTCATTGCTTAGATGTTAAACTTAATGCTGATTGGTTAACGAAACCTTCTCTGAAAAAACTCTCAGATGAGACGAGAAACTCGCTCCGGCTTACGGATCAGAATCTATATCATTTCTGCATCTTTTCGGATAATGTACTGGCAACGTCGGTCGTTGTTAACTCAACAGTTGTCAATGCTGAGTATCCAATGCAGTTAGTTTTCCATATTGTAACTGATGGTGTCAACTATGGAACAATGCAAGCATGGTTCCTCGGTAACAACTTCAAAGGTGCTACAATAGAGGTGCAGAATGTCGAAGATTTTCACTGGCTGAATGAATCTTATTCTCCGATTGTCAAACAGCTTCTCAATTCAGAATCTCGCGCCTTTTATTTCGGAGCATATCCAGATGTAAACCCTGAACCCAAACTGCGGAACAACAAGTTTTTGTCTTTACTAAACCATCTTCGGTTTTACATCCCCGAGATTTATCCACAGCTTGAGAAGATTGTTTTCCTTGACGATGATGTCGTTGTCCAGAAAGACCTAACACCACTTTTCTCACTTGAATTGCATGGAAACGTAATCGGTGCAGTCGAAACCTGTCTTGAAGCTTATCACCGGTACTACAAGTATCTCAACTTCTCGAGTCCAATCTTAAGCTCAAAGTTCGATCCACAGACATGCGCGTGGTCATTAGGCATGAATGTTTTTGACTTGGTTCAGTGGAAGAAATCAAATGTGACAGCAATATACCACTACTGGCAAGAGCAGAATGCGAATGGGACGCTGTGGAAGCTCGGTACACTTTCTCCTGCACTTCTTAGTTTTTATGGTTTGGTGGAACCACTTGACAGAAGATGGCATGTATTAGGATTAGGTTATGACCTAAATATTGATAATCGGTTAATTGATAGTGCGGCTGTTATTCACTTCAATGGTAACATGAAACCATGGCTGAGATTATCTATAAGCAGGTATAGGCCACTATGGCACAAGTACATAAATCAAAGTCACCCTTATTTTCAAGAATGTGCTATAGGTTAA 1608 0.416 MPRRAAEFRRPIRRKLSYGICFLLGAFSVVGLVLLFLQHSYHEDRVKHPLLEGNKHVEHFAKDRLNFTEEISSATSFSRQLAEEMVLAKAYVVIAKEHNNLHLAWELSLKIRSCQLLLSKAAMAGRPVTKEEAEPIIKSLSSLIFKAQDIHYDIATTIVTMKSHIQALEERAIAASVQSNVFAQISAEALPKSLHCLDVKLNADWLTKPSLKKLSDETRNSLRLTDQNLYHFCIFSDNVLATSVVVNSTVVNAEYPMQLVFHIVTDGVNYGTMQAWFLGNNFKGATIEVQNVEDFHWLNESYSPIVKQLLNSESRAFYFGAYPDVNPEPKLRNNKFLSLLNHLRFYIPEIYPQLEKIVFLDDDVVVQKDLTPLFSLELHGNVIGAVETCLEAYHRYYKYLNFSSPILSSKFDPQTCAWSLGMNVFDLVQWKKSNVTAIYHYWQEQNANGTLWKLGTLSPALLSFYGLVEPLDRRWHVLGLGYDLNIDNRLIDSAAVIHFNGNMKPWLRLSISRYRPLWHKYINQSHPYFQECAIG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01747 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 67 534 IPR029993 GO:0047262
Vivi4g01747 535 Pfam Glycosyl transferase family 8 234 508 IPR002495 GO:0016757
Vivi4g01747 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 533 IPR029044 -
Vivi4g01747 535 CDD GT8_like_1 230 523 - -
Vivi4g01747 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 231 532 IPR029044 -
Vivi4g01747 535 FunFam Hexosyltransferase 232 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01747 Vivi-Chr4 78165003 78168023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01747 1 532 Glycosyltransferase AT2G20810 51.210 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01747 K13648 - gmx:100817381 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01747 4 78165003 78168023 Vivi4g01747 4 78165003 78168023 ECH
Vivi1g01818 1 38861905 38864958 Vivi4g01747 4 78165003 78168023 PCT