Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g01662 ATGTTCCGTATAAGCAACACATTGGTTGGTTTCCTTAACATACTAACCTTATTCCTTTCGCTCGCCGGAATGGTTGGTTCCGCCTACATCCACTTTCATAAAACCGACTGTCTCAAAGTATTGATGTATCCTCTCCTCTTCGGCACCATCTTCATTTTCGTCGTTTCCATTCTCGGAATAACGGGCTCCTTGTTCCGCATCAACGAGGCTCTCTATGCTTACCTTCTTGCATCGTTCTTTGTTATATTAGGGTTCATGTTGTTCACTGTTTTTGCACTGTTTGTCACTAATAAAGTGGTTGCTGAGAAGGTCTCTGATAAAGGAATTCAACAGTATAGGGTTGAGAATTTTTCTCCTTGGTTGCAGCAATATGTTATTAACGACAAAAATTGGAATGATATTAAAAGTTGTTTGGTAGATGTAGGTCTGTGTCAACGAAACATCTCCTTCGAACAGGTTGGATGCTGTCAGCCACCTGTGCAATGTGGATTCACTATGAAGAATGAAACATTCTGGGAAGTACCAAGAACAGGTCCAGCAGTGAACGATACAGATTGTAGAACATGGAAGAATAGAGAGAAAATCTTGTGTTATGATTGCAATTCATGCAAAGGACAAGTGTTGGCTAACATAAGGAAACAGTGGAGATATCTAACTATATTCAATGTTTGTGTGCTTATAATCCTCACTACTATATATGTTTTGGGATGCTATGCTATCAGGAAGAATCCAATACATCAACACCAACATTTGGAGTACCATTCATATGGAATCACCCATCATGATATTGGAATTCGTTGA 801 0.3933 MFRISNTLVGFLNILTLFLSLAGMVGSAYIHFHKTDCLKVLMYPLLFGTIFIFVVSILGITGSLFRINEALYAYLLASFFVILGFMLFTVFALFVTNKVVAEKVSDKGIQQYRVENFSPWLQQYVINDKNWNDIKSCLVDVGLCQRNISFEQVGCCQPPVQCGFTMKNETFWEVPRTGPAVNDTDCRTWKNREKILCYDCNSCKGQVLANIRKQWRYLTIFNVCVLIILTTIYVLGCYAIRKNPIHQHQHLEYHSYGITHHDIGIR 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g01662 266 PANTHER TETRASPANIN-8-RELATED 3 244 IPR044991 GO:0009734|GO:0016020
Vivi4g01662 266 Pfam Tetraspanin family 6 238 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g01662 Vivi-Chr4 69800421 69801365 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g01662 1 250 Miscellaneous Gene Families AT1G18520 38.889 6.79e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g01662 - - tpra:123914931 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g01662 4 69800421 69801365 Vivi4g01662 4 69800421 69801365 ECH
Vivi1g00432 1 8405601 8408376 Vivi4g01662 4 69800421 69801365 PCT