Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00432 ATGTCTCGATTCAGCAACAACCTAATCGGAATCCTCAACTTCCTAACCCTACTCCTCTCAATCCCCATCCTCGTCATGGGCGTCTGGCTCCACAAACAATCCACCACCGAATGCGAACGCTTCCTCGAAAAACCGATCATCGCGCTCGGCGTTTTCCTCTTGGTGGTTTCTCTCATGGGCTTAATCGGTGCTTGTTGCAGAGTTTCGTGGCTTCTGTGGTTTTATCTTCTTGTGATGTTTTTGTTGATTGTGCTGCTTTTCGCGTTCACGATCTTTGCGTTTGTTGTTACTAATAAAGGGGCCGGGGAAGCGGTGTCGAATCGGGGGTATAAGGAGTATAGGCTTGGGGATTATTCGAATTGGTTGCAGAATAAGGTTACGGATGGAAGTGCTTGGAAGAGGATTAGGAGCTGTTTGGCGTCCGGGAAGGTTTGTGAGGATTTTCAAGCAAAGTATTTGAAGGATAGTGTTGAACAGTTTCATGCTGAGCAGTTGTCTGCTCTTCAGTCTGGATGTTGTAAACCTTCAGAGGACTGTGGTTTTACTTATGTGAGCCCAACAAACTGGACGCCCGGGACTGTTAATTCTACCAACCTTGACTGTAAAGCTTGGAATAACGATCCAAAGATTCTGTGTTTTGATTGCCAATCTTGCAAGGCTGGGTTACTGCAAAACCTCAAGACTGATTGGAAGAAGGTGGCCGTTGTGAACATCATATTCCTGATTTTCCTGGTCATTGTATACTCCATCGGCTGCTGCGCATTCAGGAATAACAGGAAGGACAATTGGAAGAGATATTAG 801 0.4594 MSRFSNNLIGILNFLTLLLSIPILVMGVWLHKQSTTECERFLEKPIIALGVFLLVVSLMGLIGACCRVSWLLWFYLLVMFLLIVLLFAFTIFAFVVTNKGAGEAVSNRGYKEYRLGDYSNWLQNKVTDGSAWKRIRSCLASGKVCEDFQAKYLKDSVEQFHAEQLSALQSGCCKPSEDCGFTYVSPTNWTPGTVNSTNLDCKAWNNDPKILCFDCQSCKAGLLQNLKTDWKKVAVVNIIFLIFLVIVYSIGCCAFRNNRKDNWKRY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00432 266 PRINTS Transmembrane four family signature 66 94 - -
Vivi1g00432 266 PRINTS Transmembrane four family signature 7 30 - -
Vivi1g00432 266 PRINTS Transmembrane four family signature 39 65 - -
Vivi1g00432 266 Pfam Tetraspanin family 7 254 IPR018499 GO:0016020
Vivi1g00432 266 PANTHER TETRASPANIN-8-RELATED 3 261 IPR044991 GO:0009734|GO:0016020
Vivi1g00432 266 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00432 Vivi-Chr1 8405601 8408376 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00432 1 262 Miscellaneous Gene Families AT2G23810 64.639 3.33e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00432 - - gmx:100819507 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00432 1 8405601 8408376 Vivi1g00432 1 8405601 8408376 ECH
Vivi1g00432 1 8405601 8408376 Vivi4g01662 4 69800421 69801365 PCT