Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00421 ATGTCTGTTTCTTCTTCTTCATCTTCTCAAAATCATCATTTCCTTCTCATTCTCTCTTTCATTTTTCACATCAACAAAACAAACAACAACAAAAACAATTCCGTTGTAATGGGTCTTTTGCTTTCAAGGACTTTGGCTTCCAAATGCTTTTACCCTTTGCTTTTATCTAAGAATGTTCATAATGATTTCTTTCCTCAACAATTGGAGAACATGATTAGTTTGGTGTCTCCTAGGACGGGAAGACATTTGCAGAGATATGAGAAAGGGTGTCGCCAAGTTGTGGGATGCATACCTTATAGATACAAAAGCAATGGAACCCAAGAAAATGAAATAGAAGTTCTTTTGATTAGTGCTCAAAAGGGTAGTGGAATGCAATTCCCAAAGGGAGGTTGGGAAAGTGATGAATCCATGGAACAAGCTGCTTTGAGAGAAACCATAGAAGAAGCTGGTGTTATTGGATGTGTTGAAAGTAACTTGGGTAAATGGTGTTATAAGAGCAAACGCCAACCCATTATGCATGAAGGATACATGTTTCCTATGCTTGTTAGCAAGGAGTTGGATAATTGGCCAGAAATGAACTTAAGAAAAAGAAAATGGTTGACTGTGGATGAAGCAAAAGAAATATGCCCATATGCATGGATGAAGGAAGCTTTAGATGAATTGGTTAGTAGACAAACAACAATCAATTCAATCTAA 696 0.3693 MSVSSSSSSQNHHFLLILSFIFHINKTNNNKNNSVVMGLLLSRTLASKCFYPLLLSKNVHNDFFPQQLENMISLVSPRTGRHLQRYEKGCRQVVGCIPYRYKSNGTQENEIEVLLISAQKGSGMQFPKGGWESDESMEQAALRETIEEAGVIGCVESNLGKWCYKSKRQPIMHEGYMFPMLVSKELDNWPEMNLRKRKWLTVDEAKEICPYAWMKEALDELVSRQTTINSI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00421 231 ProSiteProfiles Nudix hydrolase domain profile. 89 222 IPR000086 -
Vivi4g00421 231 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 77 225 - -
Vivi4g00421 231 CDD Nudix_Hydrolase_9 92 215 IPR047198 GO:0016462
Vivi4g00421 231 Pfam NUDIX domain 108 219 IPR000086 -
Vivi4g00421 231 SUPERFAMILY Nudix 80 223 IPR015797 -
Vivi4g00421 231 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 78 225 - -
Vivi4g00421 231 ProSitePatterns Nudix box signature. 129 150 IPR020084 GO:0016787
Vivi4g00421 231 FunFam Nudix hydrolase 17, mitochondrial 76 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00421 Vivi-Chr4 9001757 9004346 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00421 K07766 - gmx:100527127 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g06460 5 171263567 171265117 Vivi4g00421 4 9001757 9004346 PCT