Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00314 ATGTCTCACCGCGGTGGCAACTCCAACCCGTCGGCGGCGAAAAGTGAGCTAACCGGAAACGGCACAGTTTCCACTCTGGCGAATTCGAGGCAGAGACTGAGGTCGAATCCGAACAAGGAGCACAAACCAGAAGTTTACGCTGATCTGGAATTGGATTTCAGTCCTTCGATTTTCAGTTCGTTAGAGAGACACCTTCCTCCCAACATGCTCGTTATTTCTCGTGATGATAAGGCTAAGTTCATGACGGAGATTTTGCTTAAGTATCTTCCTACTGGAGAGCGCAATAGAACTCAGAAGCATAAAGAATACAGACAGAAGATAAAATCGTATTATCAGCCTTTACATCCCGAGTTGTACACTATAAATCCTACTACATTCTTTGTGCCAACATTTCTCAAAGCAATTAGTGATAATACAGAGCAAAGCTTTAGAAGCATAATATCTGAGCCCTCTCCGGACATTCTTGTATTTCAAATGTTTCAGCCAGACTTCTGTGAGTTGTTGCTATCTGAGATTGAACATTTTGAGAAATGGGTGACTGAAGCGAATTTCCGGATCATGCGTCCCAATAGAATGAATAAATTTGGTGCCGTGCTTGATGACTTTGGGCTTGAGCCGATGCTTGACAAGCTTATGGATGATTTTGTTCGTCCTTTATCTAAAGTTTTCTTTCCAGAAGTTGGAGGATCAACCCTGGATTCACATCATGGATTTGTTGTAGAGTATGGTAATGATAAAGATGTTGACTTGGGTTTCCATGTGGATGACTCGGAAGTAACCTTGAATGTTTGCTTGGGTAAGGAATTTTCCGGAGGGGAGTTGTTTTTTCGAGGCTCAAGATGTGAGAAACATGTAAATACAGGAAGTCAGCCAGAGGAAGTCTTTGATTATTCTCATGCTCCGGGACGGGCTGTGCTCCATCGTGGGCGACATCGTCATGGTGCTAGAGCTACAACATCTGGCCATCGGATCAACTTCTTGATGTGGTGCAGAAGTTCTGTCTTTAGAGAGATGAAACTGTATCAAAAAGATTTCTCCAGTTGGTGCGGCGAATGCAATCGAATGAAACAGGAAAGACAGCACTCCACATGTGCTGCTACAAGATTGGAATTGATCACACGGGAAGGTGAATCCGCCGCATAG 1143 0.4383 MSHRGGNSNPSAAKSELTGNGTVSTLANSRQRLRSNPNKEHKPEVYADLELDFSPSIFSSLERHLPPNMLVISRDDKAKFMTEILLKYLPTGERNRTQKHKEYRQKIKSYYQPLHPELYTINPTTFFVPTFLKAISDNTEQSFRSIISEPSPDILVFQMFQPDFCELLLSEIEHFEKWVTEANFRIMRPNRMNKFGAVLDDFGLEPMLDKLMDDFVRPLSKVFFPEVGGSTLDSHHGFVVEYGNDKDVDLGFHVDDSEVTLNVCLGKEFSGGELFFRGSRCEKHVNTGSQPEEVFDYSHAPGRAVLHRGRHRHGARATTSGHRINFLMWCRSSVFREMKLYQKDFSSWCGECNRMKQERQHSTCAATRLELITREGESAA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00314 380 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 8 368 - -
Vivi4g00314 380 SMART p4hc 152 331 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vivi4g00314 380 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 233 332 IPR005123 -
Vivi4g00314 380 Gene3D q2cbj1_9rhob like domain 151 332 - -
Vivi4g00314 380 MobiDBLite consensus disorder prediction 1 33 - -
Vivi4g00314 380 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00314 Vivi-Chr4 7301026 7306514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00314 - - gmx:100812049 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00314 4 7301026 7306514 Vivi5g06544 5 172268077 172272817 ECH
Vivi4g00314 4 7301026 7306514 Vivi4g00314 4 7301026 7306514 ECH
Vivi5g06544 5 172268077 172272817 Vivi4g00314 4 7301026 7306514 PCT