Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00194 ATGCCATGTTCTAAAGAAGAAGCTCTTATTAGACTCTTCTACAATTCATCTTCCTCTTTCAAACTTCTCTTCCTTTTCATCTTCTCTTCTCTCACTTTACTTCTCAAATTCCTAAACTTCATTGGCATCTTTCCTCTTTTCCAAGGGGATCAACAATATGAATATGTTTCATCTGAGTATGAATATGATTACGATTACGAAGAAGAACAAGAACGAGAACGAGAAGAAGAAGTTCGAGAGAGTTATTTTTACGAAGATTCTATTGAGAAAGATCATTTAGTAGCTGATATAATTTGTGGTGGAGAAGCTCTTATGGTTTTGCATGAAAATAACAAATCTCAAAGGATTCACAATTTTTCTCTTGAAGAAGAAGAGTTTATAACACCACAAGAAACCTTGATTGAAGAGTTTTCAGATGAAGAAGAAACTTCAACAGAAAGTTTGCATGTTCATCATCACAAGTCACCAATTGTTTCAGATTTTGAGACAGAAATTAATGAAACAGAATTTCAAGAACAAGAAGAAGATGCTGATTCTGTTCCAGATTTTGTTCCAGATTCTGTTCAAGATTCTGTTCATGATTCTGTTCATGATTCTGTTCCAATTCAAAACAGGACCACTTCTAATGTCTCAATGAATCTATACAAAAGTGATGACTTAGTAGAAAGTAACAAAAACTATGATGAAGAACATGTTATCAAAAACAAGAAAGTGCATGAATCAAATGTTGAAAGAGATGAGAGATTTTGTGTGATTGGTGCAACACATTTGGAGAGAAATAAGAAGTTGATATTTGAAGAAAAAGATGATGAAGAGATATATGGTGATTCATGCACTGTTGGATCAACATCTAAAAGCTCTTCTGATTGGAGAAGCTCAATTGTTTGTAGAGATTCAGGAACTGATGACCCTTTTTCTTCTTCTTCAAGAGGAAGTTGTCCTAAGTGGGAATCTTACACTGTTTTTCAAAAATATGATGAAGAAATGTCTTTTCTAGAAAGAATTAGTGCTCAAAAACTTCATGAAACAGAGTCTTTAAGATCCATCAAAGTAGCTCCAAGATCAATTTCAGGGAGAATTGTGTACAAATTTTCAAGCATGAATAAAAAACCAGAAGATGCAAGCAATCACAATCCATATTGTGAATTGGAAAGTGCTTATGTTGCACAAATTTGCTTAACATGGGAAGCACTTAATTGGAACTACAAGAATTTTGAATCAAAAAGAGCTTCAAATGTTGATGTTGGTTGTCCGGCAACAATTGCACAACAATTTCAACAGTTTCAAGTTTTGTTGCAAAGATATGTTGAGAATGAACCTTATGAGTATGGTAGAAGACCTGAGATTTATGCTAGAATGAGACATTTGGCTCCAAAGTTGCTTCTAGTCCCTGAATATAGAGATTCAGATGATGATCAGAAGGAGAAGGTTGGGTTTAACTCAAAAACTTCATCAGCTTCATTTCTTGTGATAATGGAAGATGGAATCAAAACATTCATGAATTTCTTAAAGGCTGATAAAGAGAGAACATGTCAGATCCTTGCATCTTACTTTCGAAGAAATCGAAGAACCTTGATTGATCCAACATTAATCCGTCTTATGAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTTAAGGATCTTAAGCGATCTCACAAATGCTTGAGGAAAAGAAAGTTAAAGGAGGAAGAAGAGATGGAAATTTTGATGTCACTAATAGACTTAAAAGTGGTGTCAAGGGTTTTAAGAATGAGTGAGATGAATGAAAATCAATTACATTGGTGTGAAGAGAAAATTAGCAAAGTAAAAGTCATTGATGGGAAGCTACAAAGAGATTCCACTCCACTTTTCTTTCCATCACATTGA 1866 0.3382 MPCSKEEALIRLFYNSSSSFKLLFLFIFSSLTLLLKFLNFIGIFPLFQGDQQYEYVSSEYEYDYDYEEEQEREREEEVRESYFYEDSIEKDHLVADIICGGEALMVLHENNKSQRIHNFSLEEEEFITPQETLIEEFSDEEETSTESLHVHHHKSPIVSDFETEINETEFQEQEEDADSVPDFVPDSVQDSVHDSVHDSVPIQNRTTSNVSMNLYKSDDLVESNKNYDEEHVIKNKKVHESNVERDERFCVIGATHLERNKKLIFEEKDDEEIYGDSCTVGSTSKSSSDWRSSIVCRDSGTDDPFSSSSRGSCPKWESYTVFQKYDEEMSFLERISAQKLHETESLRSIKVAPRSISGRIVYKFSSMNKKPEDASNHNPYCELESAYVAQICLTWEALNWNYKNFESKRASNVDVGCPATIAQQFQQFQVLLQRYVENEPYEYGRRPEIYARMRHLAPKLLLVPEYRDSDDDQKEKVGFNSKTSSASFLVIMEDGIKTFMNFLKADKERTCQILASYFRRNRRTLIDPTLIRLMKKVNQKKKMKVKDLKRSHKCLRKRKLKEEEEMEILMSLIDLKVVSRVLRMSEMNENQLHWCEEKISKVKVIDGKLQRDSTPLFFPSH 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00194 621 PANTHER DNA LIGASE (DUF1666)-RELATED 12 621 - -
Vivi4g00194 621 Coils Coil 538 565 - -
Vivi4g00194 621 Pfam Protein of unknown function (DUF1666) 382 619 IPR012870 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00194 Vivi-Chr4 3499704 3504333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00194 - - tpra:123885200 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00194 4 3499704 3504333 Vivi4g00194 4 3499704 3504333 ECH
Vivi5g06398 5 170548174 170551229 Vivi4g00194 4 3499704 3504333 PCT