Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06694 ATGGTTGCAAATGACTACTTTCCTCCTTGGTTTAGTGTCGCTCCGATGATGGATTGGACGGATAATCATTATAGAACTCTTGCACGCCTCATTTCCAAACATGCTTGGTTATATACGGAGATGCTCGCGGCTGAAACAATTGTTTATCAAAAGGGTAATCTGGACAGATTCTTGGCATTTTCTCCAGACCAACATCCTATTGTGCTTCAAATTGGAGGCAGTAATTTAGAGAATTTGGCGAAAGCAACTGAACTTGCTGATGCTTATGGCTATGATGAGATCAACTTCAATTGTGGATGCCCTAGTCCTAGAGTAGCTGGACGTGGATGCTTTGGTGCGCGTCTTATGCTTGATCCAAAGTTTGTTGCCGAGGCTGTTTCAGTAATTGCTGCCAATACAAATGTACCTGTCAGTGTCAAATGTCGAATCGGCGTGGATGATCATGATTCATACAATGAACTATGTGATTTCATTTACAAGGTCTCTTCTCTGTCACCTGCTAGGCATTTCATAATTCACTCAAGAAAGGCACTATTGAATGGCCTCAGTCCCGCTGAAAATCGGAGTATTCCTCCACTGAAATATGAATACTTTTATGGCCTCTTGCGCGACTTTCCTGACTTAACATTTACAATCAATGGTGGCATTAATTGTGTTGATGAGACCAATGCAGCTCTAAAGATTGGCGCTCATGGTGTTATGGTTGGACGTGCTGCCTACCACAACCCTTGGCATATTTTGGGAAATGTTGATACTGGAATTTATGGTGTACCAAGTATTGGTCTTACACGTCGTCAGGTCCTTGAGAAATACCAAGTATACGGAGACTCAGTGTTATTAAAATATGGATTTCGGCCAACTGTGCGAGACATTGTGAAGCCTTTACTTGGTTTTTTCCATTCTGAGCCTGGGAATGGACTTTGGAAGCGCAAAGCAGATTCTGCTTTCCAAACTTGCACAACAGTAAAATCATTTCTTGAAGAAACTATGGTAGCAATTCCAGACTCTGTTTTGGATTCGTCGTTTGCGAAATCACCGCCAGGGCGTGAAGATCTTTTTGCTAACATTGACAGTTTATTGCCTCCACCATACAGAACAAGAGATGAGGATTCTGTTTACATCCATTAG 1128 0.4211 MVANDYFPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAFSPDQHPIVLQIGGSNLENLAKATELADAYGYDEINFNCGCPSPRVAGRGCFGARLMLDPKFVAEAVSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPARHFIIHSRKALLNGLSPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGINCVDETNAALKIGAHGVMVGRAAYHNPWHILGNVDTGIYGVPSIGLTRRQVLEKYQVYGDSVLLKYGFRPTVRDIVKPLLGFFHSEPGNGLWKRKADSAFQTCTTVKSFLEETMVAIPDSVLDSSFAKSPPGREDLFANIDSLLPPPYRTRDEDSVYIH 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06694 375 SUPERFAMILY FMN-linked oxidoreductases 10 311 - -
Vivi3g06694 375 ProSitePatterns Uncharacterized protein family UPF0034 signature. 94 113 IPR018517 GO:0008033|GO:0017150|GO:0050660
Vivi3g06694 375 Gene3D Aldolase class I 7 249 IPR013785 -
Vivi3g06694 375 FunFam tRNA-dihydrouridine(20/20a) synthase 8 255 - -
Vivi3g06694 375 Pfam Dihydrouridine synthase (Dus) 13 327 IPR035587 -
Vivi3g06694 375 CDD DUS_like_FMN 11 244 IPR035587 -
Vivi3g06694 375 PIRSF Dus 1 344 IPR001269 GO:0008033|GO:0017150|GO:0050660
Vivi3g06694 375 Gene3D - 260 326 - -
Vivi3g06694 375 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 5 368 IPR004653 GO:0002943|GO:0017150
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06694 Vivi-Chr3 188886322 188894415 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06694 K05539 - gmx:100785422 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01506 5 46701615 46705465 Vivi3g06694 3 188886322 188894415 PCT