Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06626 ATGGCGAACCAGAATCAAAACCTGATCCAGCGGAAGCAACGTGAAGATTTTTCTTTGAAGGAGACAACACCTAACATCAATGCCGGAAGAGTGATAAGTGGTGACAGGCTTCCAACTGCATTTGATCTTGTTGAACAGATGCAGTTTCTTTTCGCTCGGGTAGTGAGGGCGAAAGACTTACCGGAAACCGGTAAATCGGATACCTGCAACCCTTTCGTCGAAGTGAAACTCGGAAGTTTCGTAGGAACAACAAAGGTTTTCGAGAAAAATTCAAATCCGGAGTGGAACCAGGTTTTCGCTTTTTCTAAAGAGAGGATTCAAGAACAAGTTTTGCAGATTGTTGTGAAGGAGAAGGATGTTCCTGATGCGTTGATCGGTCGTGTCGCGTTCACGATTTCGGATATTCCTATGAGGTTTCCGCCTAATAGTCCTTTGGCGCCGCAGTGGTATAAGCTAGAGAATCTCAGTGGTGTGAAGCTTGATCAAGGAGAGTTAATGGTTTCTGTTTGGATGGGAACACAAGCTGATGAGAGTTTTCCTGATGCTTGGCATTCAGATGCAACTGCTACGAGTGACGAGAACATCGCGTACACTCGCTCGAAAGTGTATATCTCTCCGAGGCTTTGGTATCTTAGAGTTACTGTGATTCAAGCACAAGATTTGTTACTCAAGAACAAAAGTGGAAACAATGGTGACATATTTATTCAAGGTGTTCTTGGGAACTTGGCGTTGAGAAGCCGGCCGATGAGGATTCATCCGAATCCTATATGGAACGAGGATTTGATGTTTGTTGCAGCCGAGCCTTTCGATGATTCCTTGCTTTTGAGCATTGAGCAAGGTCTAGGAAACTCCAACAAGCATGAAAGTTTGGGCAGTTGTGTGATTCATCTTAAGGACGTGGAGAGAAGAATCGACGCAACTCCAACGGCTAGTGTTTGGTACAATCTTCAAACGCCTAAAGAACTCGAAGGCGACGAGGGCATTAAATTTAGTACTAAACTGCATTTTCGAATCTCTTTGGATGGAGGGTATCATGTTTTGGATGAGGCAACTCACTATAGTAGCGATCTAAGGCCGTCGTCTAAGTATTTGAACAAACCAAGTATCGGTGTTTTGGAATTAGGAATCTTGAACGCGGTTGGACTATCTCCGATGAAGAAGGATCGAACTGATGCGTATTGTGTAGCGAAGTATGGTCCAAAGTGGGTGAGAACAAGGACTATTGTCGATAGTTTTTCACCGAGATGGAATGAGCAATATACTTGGGAAGTTTATGATCCTTGCACCGTTATCACGATTGTCGTGTTTGATAATGGAAACTTACATGGAGGAGGGAAAAATGGAGACGGAGGAGTCGATAAGAGAATCGGTAAGGTAAGGATTAGGCTTTCGACACTCGGAAGTGATAGAATCTATACTCATTTTTATCCACTTATAAACTTGCATACTCAAGGAGCACGAAAAATGGGAGAAATTCAATTGGCAGTGAGATTTTCTTGTCCTTCTTTGTTGAATGTTTTGCAAACCTATACTCAACCTTTGCTCCCGAAAATGCACTACCTATGTCCGTTGTCGATGTTTCAGCTCGATAGTTTACGAAACCAGGCTGCAGCGATCACGATAATGAGGTTCAGAAGAGCCGAACCGCCTCTTAGTAAAGAGGTAGTTGAGTTCATGCTGGATATGAGAGCAAATGTGTGGAGCATGAGGAGAGGAAGAGCTCAGTTTTACAGGATCGCGAGTCTTCTCAGCGGTTTAGTCTGGTTTATCAAAAAATTCGAGGAGATTCGCAGTTGGAAGAGTTCGTTTACAACGATAGCTGGTTATATCATGTTTCTCTTTATCATTTACAAGCCAGGAGTTATTTTGCCATTCATGTTTACCATCTTATTCTTTAACGGAATTTTGAACTTCCGAATTAGCGGCGGTAATCTTCAGAAAAGGTACGACAGATTGCGTGGCATTTCGGGAAGAGTGCTCGCTGTGATGGGCGATTTGGCAACCCAAGGAGAGAGAGTGCAGGCCCTTATCAGCTGGAGGGATCCAAGAGCAACAGCATTGTTCCTGATTTTCTGCGTGGTTGCTATGATTTTGACTTTTGTCATTTCTTTTCGCATTATCGTCTTCCTTTCGGTCACTTATGTGTTAAGACCTCCAAGGTTTCGCTTCGATTTGCCAGCGTTTCCGCAAAACTTCCTCAGGAGGATGCCTGCAAAATCAGATGGCATGTTATGA 2235 0.4358 MANQNQNLIQRKQREDFSLKETTPNINAGRVISGDRLPTAFDLVEQMQFLFARVVRAKDLPETGKSDTCNPFVEVKLGSFVGTTKVFEKNSNPEWNQVFAFSKERIQEQVLQIVVKEKDVPDALIGRVAFTISDIPMRFPPNSPLAPQWYKLENLSGVKLDQGELMVSVWMGTQADESFPDAWHSDATATSDENIAYTRSKVYISPRLWYLRVTVIQAQDLLLKNKSGNNGDIFIQGVLGNLALRSRPMRIHPNPIWNEDLMFVAAEPFDDSLLLSIEQGLGNSNKHESLGSCVIHLKDVERRIDATPTASVWYNLQTPKELEGDEGIKFSTKLHFRISLDGGYHVLDEATHYSSDLRPSSKYLNKPSIGVLELGILNAVGLSPMKKDRTDAYCVAKYGPKWVRTRTIVDSFSPRWNEQYTWEVYDPCTVITIVVFDNGNLHGGGKNGDGGVDKRIGKVRIRLSTLGSDRIYTHFYPLINLHTQGARKMGEIQLAVRFSCPSLLNVLQTYTQPLLPKMHYLCPLSMFQLDSLRNQAAAITIMRFRRAEPPLSKEVVEFMLDMRANVWSMRRGRAQFYRIASLLSGLVWFIKKFEEIRSWKSSFTTIAGYIMFLFIIYKPGVILPFMFTILFFNGILNFRISGGNLQKRYDRLRGISGRVLAVMGDLATQGERVQALISWRDPRATALFLIFCVVAMILTFVISFRIIVFLSVTYVLRPPRFRFDLPAFPQNFLRRMPAKSDGML 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06626 744 Gene3D C2 domain 193 338 IPR035892 -
Vivi3g06626 744 ProSiteProfiles C2 domain profile. 31 150 IPR000008 -
Vivi3g06626 744 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 50 187 IPR035892 -
Vivi3g06626 744 Gene3D C2 domain 368 502 IPR035892 -
Vivi3g06626 744 CDD C2B_MCTP_PRT_plant 49 173 IPR047257 -
Vivi3g06626 744 Pfam Plant phosphoribosyltransferase C-terminal 645 744 IPR013583 -
Vivi3g06626 744 Gene3D C2 domain 39 171 IPR035892 -
Vivi3g06626 744 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 11 640 IPR047259 -
Vivi3g06626 744 ProSiteProfiles C2 domain profile. 353 476 IPR000008 -
Vivi3g06626 744 ProSiteProfiles C2 domain profile. 187 314 IPR000008 -
Vivi3g06626 744 SMART C2_3c 210 309 IPR000008 -
Vivi3g06626 744 SMART C2_3c 49 144 IPR000008 -
Vivi3g06626 744 SMART C2_3c 371 475 IPR000008 -
Vivi3g06626 744 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 370 502 IPR035892 -
Vivi3g06626 744 FunFam C2 domain-containing protein 353 502 - -
Vivi3g06626 744 CDD C2C_MCTP_PRT_plant 210 359 IPR047258 -
Vivi3g06626 744 Pfam C2 domain 209 316 IPR000008 -
Vivi3g06626 744 Pfam C2 domain 371 478 IPR000008 -
Vivi3g06626 744 Pfam C2 domain 52 151 IPR000008 -
Vivi3g06626 744 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 209 361 IPR035892 -
Vivi3g06626 744 CDD C2D_MCTP_PRT_plant 371 495 IPR047255 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06626 Vivi-Chr3 184880481 184882848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g06626 9 744 Lipid Metabolism Gene Families AT3G57880 55.270 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06626 - - gmx:100816193 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04557 6 147513768 147517252 Vivi3g06626 3 184880481 184882848 ECH
Vivi1g07527 1 196052354 196055680 Vivi3g06626 3 184880481 184882848 ECH
Vivi3g06626 3 184880481 184882848 Vivi3g06626 3 184880481 184882848 ECH