Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g07527 ATGCAGAGGCCACCACCTGAAGATTTTCTGTTGAAAGAGACCAAACCTCATCTTGGAGGTGGAAAAGTTTCTGGAGATAAACTAACAAGCACTTATGATCTTGTTGAGCAAATGCTATACCTTTATGTAAGGGTTGTTAAAGCCAAGGATTTGCCTTCCAAGGATGTTACCGGAAGTTGCGATCCTTATGCGGAAGTTAAGCTTGGGAACTATAAAGGAACTACTCGGCATTTCGAGAAGAAAACGAATCCGGAATGGAATCAGGTTTTTGCTTTCTCCAAGGACCGGCTCCAGGCGTCGGTGCTTGAGGTTACTGTGAAAGATAAGGATGTTGTCAAGGATGATTTCATTGGTCGTGTGTGGTTTGATTTGAACGAGGTTCCGAAACGGGTTCCTCCGGATAGTCCGTTGGCGCCACAGTGGTATAGGTTGGAGGATAGGAAGGGTGATAAGGTTAAGGGAGAGTTGATGCTGGCTGTTTGGATGGGTACACAGGCGGATGAAGCGTTTCCGGAAGCTTGGCATTCGGATGCTGCGACTGTTAGTGGGACCGATGCTCTTGCGAATATTAGGTCGAAAGTTTATTTGTCTCCGAAGCTTTGGTATTTGAGAGTCAATGTGATTGAGGCACAGGACTTGCAACCGACTGATAAGGGTAGATATCCAGAGGTTTTCGTGAAGGCTATTTTGGGGAATCAAGCATTGAGGACTAGAATTTCTCAGAGCAGGAATATCAATCCGTTGTGGAATGAGGATTTGATGTTTGTTGCTGCGGAACCGTTCGAGGAGCCACTGATTTTGAGTGTGGAAGACAGAGTTGCTCCAAACAAAGAAGAAGTATTGGGGAGGTGTGCAATTCCTTTGCAGTTTATGGATAGGAGACTAGATCACAAACCGGTGAATACTCGGTGGTTTAATCTTGAAAAACATATTGTTGTTGAAGGGGAAAAGAAGAAAGAGATTAAGTTTGCTAGTAGGATTCACATGAGGGTTTGTCTAGAAGGTGGCTATCATGTTTTGGATGAATCAACTCACTACAGCAGTGATCTTCGCCCGACTGCGAAACAGCTATGGAAATCTGGAATTGGTGTTCTTGAAGTTGGGATATTGAGTGCACATGGTTTGATGCCGATGAAAAATAAAGACGGGAGAGGGACAACAGATGCTTACTGTGTAGCGAAATACGGGCAAAAGTGGATCCGAACAAGGACAATAGTTGATAGCTTTATGCCAAGGTGGAATGAGCAATATACTTGGGAGGTTTTTGATCCTTGCACTGTCATTACAATTGGTGTATTTGACAATTGTCATTTGCATGGTCCTGAAAAAGCTGGAGGAGCAAAAGATGCGAGAATCGGTAAGGTAAGGATCCGTCTTTCGACGCTCGAGACTGATCGGGTTTACACACATTCCTATCCACTTCTAGTTCTTCACCCGAATGGTGTGAAGAAAATGGGTGAAATTCAATTAGCCGTGAGGTTCACTTGTTCTTCGTTGCTCAACATGATGCACATGTATTCGCTACCTTTGTTGCCGAAGATGCACTACATACACCCTTTGACTGTTAGCCAGCTCGACAGTTTGAGGCATCAAGCTACTCAGATTGTTTCAATGAGGCTGACCCGCGCCGAGCCGCCACTGAGAAAGGAGGTAGTTGAGTATATGCTCGATGTTGGTTCTCACATGTGGAGCATGAGAAGAAGCAAGGCTAATTTCTTCAGAATCATGGGAGTATTGAGTGGACTTATCGCCGCAGGAAAATGGTTTGATCAAATTTGCAATTGGAAAAATCCAATTACAACAGTTCTGATTCATATCTTGTTTATAATATTGGTCATGTATCCTGAACTTATTTTACCTACAGTTTTCCTTTACCTTTTCCTGATCGGAATCTGGCACTATAGATGGAGGCCGAGACACCCTCCCAACATGGACACTCGACTCTCTCATGCTGATTCAGCTCATCCCGACGAACTTGACGAAGAGTTCGACACATTTCCAACTTCACGGCCTTCTGACATTGTTCGGATGCGATACGATCGACTCAGAAGCATTGCTGGTCGTATACAGACTGTGGTCGGTGACTTGGCTACTCAAGGGGAAAGGCTGCAGTCCTTGCTGAGCTGGCGTGATCCGAGAGCTACCGCCCTGTTTGTGATTTTCTGTCTTATTGCTGCTACTATACTTTATGTAACTCCATTCCAAGTTGTGGCCCTCCTGGCTGGAATTTATGTGCTGAGACACCCGAGGTTCCGTCAAAAGCTTCCGTCGGTGCCACTTAATTTCTTCAGGAGGCTGCCTGCAAGAACTGACTGCATGCTTTGA 2325 0.4503 MQRPPPEDFLLKETKPHLGGGKVSGDKLTSTYDLVEQMLYLYVRVVKAKDLPSKDVTGSCDPYAEVKLGNYKGTTRHFEKKTNPEWNQVFAFSKDRLQASVLEVTVKDKDVVKDDFIGRVWFDLNEVPKRVPPDSPLAPQWYRLEDRKGDKVKGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRYPEVFVKAILGNQALRTRISQSRNINPLWNEDLMFVAAEPFEEPLILSVEDRVAPNKEEVLGRCAIPLQFMDRRLDHKPVNTRWFNLEKHIVVEGEKKKEIKFASRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSGIGVLEVGILSAHGLMPMKNKDGRGTTDAYCVAKYGQKWIRTRTIVDSFMPRWNEQYTWEVFDPCTVITIGVFDNCHLHGPEKAGGAKDARIGKVRIRLSTLETDRVYTHSYPLLVLHPNGVKKMGEIQLAVRFTCSSLLNMMHMYSLPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLTRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAAGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTVFLYLFLIGIWHYRWRPRHPPNMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVIFCLIAATILYVTPFQVVALLAGIYVLRHPRFRQKLPSVPLNFFRRLPARTDCML 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g07527 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Vivi1g07527 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Vivi1g07527 774 MobiDBLite consensus disorder prediction 1 15 - -
Vivi1g07527 774 Gene3D C2 domain 188 331 IPR035892 -
Vivi1g07527 774 FunFam C2 domain-containing protein 188 333 - -
Vivi1g07527 774 FunFam C2 domain-containing protein 346 498 - -
Vivi1g07527 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Vivi1g07527 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 177 IPR035892 -
Vivi1g07527 774 Pfam C2 domain 201 307 IPR000008 -
Vivi1g07527 774 Pfam C2 domain 363 474 IPR000008 -
Vivi1g07527 774 Pfam C2 domain 40 142 IPR000008 -
Vivi1g07527 774 CDD C2C_MCTP_PRT_plant 202 352 IPR047258 -
Vivi1g07527 774 Gene3D C2 domain 40 161 IPR035892 -
Vivi1g07527 774 MobiDBLite consensus disorder prediction 1 24 - -
Vivi1g07527 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Vivi1g07527 774 Gene3D C2 domain 361 498 IPR035892 -
Vivi1g07527 774 ProSiteProfiles C2 domain profile. 22 142 IPR000008 -
Vivi1g07527 774 CDD C2B_MCTP_PRT_plant 40 164 IPR047257 -
Vivi1g07527 774 SMART C2_3c 40 136 IPR000008 -
Vivi1g07527 774 SMART C2_3c 364 471 IPR000008 -
Vivi1g07527 774 SMART C2_3c 202 300 IPR000008 -
Vivi1g07527 774 FunFam C2 domain-containing protein 35 179 - -
Vivi1g07527 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 504 IPR035892 -
Vivi1g07527 774 CDD C2D_MCTP_PRT_plant 364 491 IPR047255 -
Vivi1g07527 774 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 6 774 IPR047259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g07527 Vivi-Chr1 196052354 196055680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g07527 1 774 Lipid Metabolism Gene Families AT3G57880 91.731 0.0 1492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g07527 - - zju:107407989 1475.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g07527 1 196052354 196055680 Vivi3g06626 3 184880481 184882848 ECH
Vivi1g07527 1 196052354 196055680 Vivi1g07527 1 196052354 196055680 ECH
Vivi6g04557 6 147513768 147517252 Vivi1g07527 1 196052354 196055680 PCT