Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g06289 ATGGTGGCCGACAAGAGCAAGAAGCTTAAGGTTTCTGAAAAGGGCGACAACGCCGAGGAAATAGACGGAGAACTTGTCCTCTCCATTGAAAAGTTGCAGGAAATGCAAGATGAGCTCGAAAAGATCAATGAGGAGGCTAGTGATAAAGTTCTGGAAATAGAGCAGAAGTACAACGAGATAAGGAAGCCGCTGTATGATCAGCGCAATGATCTTATCAAGTCTATTCCTGATTTCTGGTTGACTGCTTTTTTGAGCCATCCTGCTCTTGGTGAACTTTTGAACGATGAAGATCAGAAGATATTTAAGCATTTAAGTTCTCTTGAGGTTGAAGATCATAAAGATGTTAAATCAGGCTATTCAATCACCTTCAACTTTAATCCTAATCCCTATTTTGAGGATACAAAGCTTGTAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAAAGGTTACTGCTACTCCCATTAAATGGAAAGAGGGCAAGAACATTCCAAATGGAGTTAGCCAAGAGAAGAAAGGGAAAAAGCGGGCTGCTGCTGATATCAGTTTCTTTACCTGGTTTAGTGACCCCGAAGAGAAAGAAGATTTGGATGACCTCATTAATGATGAGGTTGCAGAACTAATCAAGGATGATTTATGGCCAAATCCACTTAATTATTTCAACAGCGAGGACCCTGATGAAGCAGAAGATGACGATGATGAAGCTGGTGATACGGGAAAGGACGACGACGAAGACTCTGAAGACGATGATGGTGATGATGACGAAGAGGAGGATGAATAG 780 0.4141 MVADKSKKLKVSEKGDNAEEIDGELVLSIEKLQEMQDELEKINEEASDKVLEIEQKYNEIRKPLYDQRNDLIKSIPDFWLTAFLSHPALGELLNDEDQKIFKHLSSLEVEDHKDVKSGYSITFNFNPNPYFEDTKLVKTFTFLEEGTTKVTATPIKWKEGKNIPNGVSQEKKGKKRAAADISFFTWFSDPEEKEDLDDLINDEVAELIKDDLWPNPLNYFNSEDPDEAEDDDDEAGDTGKDDDEDSEDDDGDDDEEEDE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g06289 259 Gene3D - 1 75 - -
Vivi3g06289 259 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 14 241 IPR002164 GO:0005634|GO:0006334
Vivi3g06289 259 SUPERFAMILY NAP-like 7 220 IPR037231 -
Vivi3g06289 259 Pfam Nucleosome assembly protein (NAP) 73 221 IPR002164 GO:0005634|GO:0006334
Vivi3g06289 259 MobiDBLite consensus disorder prediction 211 259 - -
Vivi3g06289 259 Coils Coil 25 59 - -
Vivi3g06289 259 Gene3D Nucleosome assembly protein 76 224 - -
Vivi3g06289 259 MobiDBLite consensus disorder prediction 223 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g06289 Vivi-Chr3 165769419 165773171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g06289 K11290 - gmx:100793432 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01943 1 41390022 41396556 Vivi3g06289 3 165769419 165773171 ECH
Vivi3g06289 3 165769419 165773171 Vivi3g06289 3 165769419 165773171 ECH
Vivi3g06289 3 165769419 165773171 Vivi1g01943 1 41390022 41396556 PCT