Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01943 ATGGTAGGAGACAGGTCAAAGAAGTTGAAACTTTCTGAGAATCCCGAAGAGGTTGACGGCGAACTCATCCTCTCCATCGAGAAGTTGCAAGAGATCCAAGACAGTCTCGAAAAGATCAATGATGAAGCTAGTGATAAGGTCCTTGAAATTGAGCAGAAGTACAATGAGATAAGGAAACCAATTTATGATAAGCGGAATGAGATCCTCAAATCTATTCCTGACTTCTGGTTGAATGCTTTTTTGAGTCATCCTACCCTTAGTGAACTTCTGAACGAGGAAGATCAAAAGATATTCAAGTATTTGAGTTCTCTTGAGGTTGAAGATAATAAAGATGTAAAATCTGGATACACAATCACCCTTAATTTCAATCAGAATCCCTATTTTGAAGATTCAAAACTTTCAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAAATATCACTGCTACCCCCATTAGATGGAAAGAGGGCAAGGGAATACCCAATGGTGTTGATCATGAGAAGAACGGGAACAAACGGGCTCCTGTTGATGTCAGTTTCCTTAGTTGGTTTTGTGACTGTGAGCAGAAAGACGATGATCTGCTTGACATTCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGTCAAACCCACTTATTTATTTCAACAATGAGGAGCTTGATGAAGAGGATGGCAATGATGAAGCTGATGATGAGGAGAAAGATGAGGATGACTCTGAAGAAGATGATGACGAGGGTGACAATGAGGAAGACAATTAA 765 0.3935 MVGDRSKKLKLSENPEEVDGELILSIEKLQEIQDSLEKINDEASDKVLEIEQKYNEIRKPIYDKRNEILKSIPDFWLNAFLSHPTLSELLNEEDQKIFKYLSSLEVEDNKDVKSGYTITLNFNQNPYFEDSKLSKTFTFLEEGTTNITATPIRWKEGKGIPNGVDHEKNGNKRAPVDVSFLSWFCDCEQKDDDLLDIHDEVAELIKDDLWSNPLIYFNNEELDEEDGNDEADDEEKDEDDSEEDDDEGDNEEDN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01943 254 SUPERFAMILY NAP-like 12 218 IPR037231 -
Vivi1g01943 254 Coils Coil 26 53 - -
Vivi1g01943 254 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 15 235 IPR002164 GO:0005634|GO:0006334
Vivi1g01943 254 MobiDBLite consensus disorder prediction 218 254 - -
Vivi1g01943 254 MobiDBLite consensus disorder prediction 219 254 - -
Vivi1g01943 254 Gene3D - 2 72 - -
Vivi1g01943 254 Gene3D Nucleosome assembly protein 73 221 - -
Vivi1g01943 254 Pfam Nucleosome assembly protein (NAP) 70 219 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01943 Vivi-Chr1 41390022 41396556 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01943 K11290 - gmx:100808081 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01943 1 41390022 41396556 Vivi3g06289 3 165769419 165773171 ECH
Vivi1g01943 1 41390022 41396556 Vivi1g01943 1 41390022 41396556 ECH
Vivi3g06289 3 165769419 165773171 Vivi1g01943 1 41390022 41396556 PCT