Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04143 ATGGTGTTTAAGAAGAGGGCAAATCATGGATTCACTGGCTTTCAAGTTCCCGTTATTCCTCGAGCTCCTAGATCTGCAAGGCGGAGGGGTCCATTGAAAAAAACGGTTGACGATGGTCAAGTTTGTGCTTTTGAAATATTGGCATCTATAGCTGGAAAGCTATTGGAGGAGGGAGAAAGTTCAGCGTCTAGCAATGCTTCAGGAGGAAATATCCAAGGTGTCATTGTTGAAGATCGACAAGATGAAGTTAAGCCATTGATAACGGAGGGAATTCACCAGGGAAGCTGTACAGAGAGTATTTTCGCAACGGAGGTAGCCTCACAAAACCGTGATCAGAAACCTATTCTGCACGCCAATTCCGATTTTTCATTGGAAAAAGGTGAAAAAGCTAATGTGAAGACCGAAGCTGTTGAATCAGATGATAAATATGTGAATTATACTAATAGATTAGTAGTAGAAGCACCTGAAAATTTCAGGAAGTCTTATAACAGGAAAATAAAGAAAGGATTCAGATCCGATAAATATGGTTTGAAAGACCGGTTGGAATTGTATATGTCTCCTTCTCTGGTCGACTCGAAATTTGATGTAAAATATCCATTTCATAGGAAGCCATTTCCCACTAATTCCTTTACCAAGGATGGGAATGACATTAAGTTAGATTTTAGAGATGATGACGAAAACTTTATAAGGTGTACAAAGGTTTCCGCCAAGTCGAAGACTTTTAGGTCTCCACGACGCATGGCACACCGCAGAATCAAGAATCTGCTGTCTTCTAAATACTGGAACGTCGCTCCAAAATTGAAGGACTGTGAACTTTCTAGATCTGATCTAGAAGTACCTCTTTATTGTAAGAGGAAGACTTCTCACGGTTCCGACAAATCTCGTCACAGCACTATTGTTAAGAGGAGGAAATTCTTTGACCGGGTTTCTGGAGTAACTTCCGATGGAGGATTCAGCAGTGAGAGTGTGACTAATTCGCCCGAGAAAGGAAAGGATGGACACAAGCCTAGCTCTTCTGCAAAACTGCAAGTAACCGAGGAATCTCGAGTGAAGTTTAGCATCAAGTCATTTAGAATACCAGAGCTTTACATTGAGGTTCCCGAAACTGCTACCGTCGGTTCACTAAAGAGGACAGTCATGGAGGCAGTGATGGCTATAATCGAAGGCGGTATGCATGTCGGTGTTCTTCTTCAGGGCGAAGCAATCGGAGATGACAATAGAACACTTGAGCAGACAGGTTTATCCTGCAATGAGAATCTCGATACTCTTAGTTTCATGTTGGAGCCTAGTTCAATAGTAGCTTCTCCAGTTTCTTGTATCGGTGATCCTTCTTCTCAATGCGATACATCCGAACCTACCAGGTCTCCGGAAACTCTTGCATTAGATTCAGGGATAACCGATACCATACATGACTCCAGTTTGCCGATAATTCCAGGCAACATAGTGGAAAATAACCATGATTCTACTTATTCTCCAACTGACACCATAGTTGACAAAATAACACCAGATTCCAAAGCGATAGTTGCTCTTCCGGCCAGTAATGAAGCATTAGCTGTGGTACCGCTGAGTCAGAAAACCAAGCGCTCTGAGTTTGTACATCGTCGAACCAGGAGACCGTTCTCCGTGACTGAGGTAGAAGCACTTGTTCATGCAGTAGAAGAACTTGGAACTGGAAGGTGGCGTGATGTTAAGTTGCGAGCTTTTGATAATGCAGATCATAGAACTTATGTAGACTTAAAGGATAAATGGAAAACACTAGTGCACACTGCAAAAATCTCCCCACAACAAAGGAGAGGGGAGCCAGTACCTCAGGAGCTATTGGACAGAGTTTTAGGAGCACATGCTTATTGGTCCCAGCACCAAATCAAGCAACATGGGAAACATCAAGGTGGAACATTGAAGATTACAGAAGCTTCAGCAGAAAGGGTGTCTATTCAGGTGTAG 1944 0.4275 MVFKKRANHGFTGFQVPVIPRAPRSARRRGPLKKTVDDGQVCAFEILASIAGKLLEEGESSASSNASGGNIQGVIVEDRQDEVKPLITEGIHQGSCTESIFATEVASQNRDQKPILHANSDFSLEKGEKANVKTEAVESDDKYVNYTNRLVVEAPENFRKSYNRKIKKGFRSDKYGLKDRLELYMSPSLVDSKFDVKYPFHRKPFPTNSFTKDGNDIKLDFRDDDENFIRCTKVSAKSKTFRSPRRMAHRRIKNLLSSKYWNVAPKLKDCELSRSDLEVPLYCKRKTSHGSDKSRHSTIVKRRKFFDRVSGVTSDGGFSSESVTNSPEKGKDGHKPSSSAKLQVTEESRVKFSIKSFRIPELYIEVPETATVGSLKRTVMEAVMAIIEGGMHVGVLLQGEAIGDDNRTLEQTGLSCNENLDTLSFMLEPSSIVASPVSCIGDPSSQCDTSEPTRSPETLALDSGITDTIHDSSLPIIPGNIVENNHDSTYSPTDTIVDKITPDSKAIVALPASNEALAVVPLSQKTKRSEFVHRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFDNADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLDRVLGAHAYWSQHQIKQHGKHQGGTLKITEASAERVSIQV 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04143 647 Gene3D - 525 629 - -
Vivi3g04143 647 FunFam Telomere repeat-binding protein 1 526 629 - -
Vivi3g04143 647 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 534 591 IPR017930 -
Vivi3g04143 647 SUPERFAMILY Homeodomain-like 538 619 IPR009057 -
Vivi3g04143 647 CDD SANT_TRF 538 588 - -
Vivi3g04143 647 ProSiteProfiles Myb-like domain profile. 532 587 IPR001005 -
Vivi3g04143 647 SMART sant 536 589 IPR001005 -
Vivi3g04143 647 MobiDBLite consensus disorder prediction 313 342 - -
Vivi3g04143 647 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 628 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04143 Vivi-Chr3 72751515 72755719 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04143 - - gmx:100814318 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07419 2 218504947 218510592 Vivi3g04143 3 72751515 72755719 ECH
Vivi3g04143 3 72751515 72755719 Vivi3g04143 3 72751515 72755719 ECH