Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07419 ATGGTGGCGCAGAAGAGGATAGATTATGGATTTGTTGGCTATCAGGTGCCAACAAAGCCGCGTGCCGCACGATCAACTAGGAAGAGGGATACATTTCAAACAAGGGTGGAAAACAATCAAATGTGCGCGATTGACTTATTGGCCACCGTAGCATCCGGAACTTTATTGCATGAGAAACATAATCCAATCACGTCTAGTGATGAATTATTGAAAAAAGATCAGCGAGGATTTGTTAAAGAAGAATCCCAAGATGCAAATAAACCATTCAAAGCCGAGCTTCCTGATGAAGCAAGTTGTGAGAAAAGGCTTCAACATGGATTCGTTAAGGAAGGGTGCTTGGATATGAACAAGCCGTTAAAAGCCGAGTTTTCTGATGAGGGAAGTAGTGACAGGAAATGTATCTCTACTCTTTCTTTACAGGAGTTTGATCTAAATTCTGGTTTGAAGGAAAGTCCGCGTCCTGAAATTGACGGTCGTTCATGCATTGCTTCTGTATTAACAAGTTCTAGTGGCTCGGAGAGGTTGGTTACCGACACTTTGGTGGATGTTAAAAGCCATAGTGAAATGAAAAATATAACTAGCAAAGTTGAGTTAGGATCCTCTGAATTTCCAGATTGTAGTGATTGCAACTTAGATGTTGATGTAAGTATAGTAAAGGACGAGCTCCGAAAATCTGAGATGCCAATCGGTATTGAGACGGGAACGCGCTGTTTTAAGGATCCAATAGATGATAAACCTCCGACGCTGGTCGTTTCAGGTGGAAATGCTAAGTTGTCAGGGCACAACGATAGCATACCTCGTAGCTCGTTGTTAAAAGGTTGTGACAATGTATCAGTAGTTAGTAGAGATGATGACGAAAACAAATCAGGGTGTGCTCACCCTAGTTCAAAAACTAAGGCCTTTAGGCCGAAGACTTGTATAGGTGATCAAAGAATAAGGAAAAGGTTGGCTTCTAAATATCGGAAAGTTGCTCGAGAATCAAAGCATGATACACTTTCTAACAATGTTTTGGATAGAAATTTCAACACAGTTTACAATGGTAGGAAGAACAGTTATAGTCACCAAATATCTCAAATGAATATTCCTTTCAAAAAGAGGAAGATTTTTGACTGCAGCTCCACTTCAAATTCTAATGGAAATATCAGAAGTGGCCGCACTTTTTATTCAACTAAGAACGACATCAATCAAGGAGTTTCTTGTTCATCAGCTCGGATGCGCAAAGATCCTGGAAAGTCATCCTTGGAAGCATATCATCATCGTTCTGCTTTAAAATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCAGAGCTTTTTATTGAGATTCCAGAAACTGCAACCGTCGCTTCCTTGAAGAAAGCAGTAATGGAGGCAGTGACTACTCTACTTCGAGGTGGATTGCGTGTTGGTATGATTCTCCATGGAAAGAAACTTAGAGATGACAGTAAAACTCTCCTTCAGACCGGAATTTCTCATGATAACGAGCTGGATGCTTTAGGATTCACCTTGGAGCCTAATGCTTCTCAAAGCCTACCACTCACATGTGCTAAAGATTCTCTTAATGTTCCCAATGGAGACACGCCTCTATCTATAATAGGGCATCCTTCGAGTCCAGCTGTAGTTCTTCCGATTCAAAGGATTCAAGGTTTCTCTGACACCGACCATCAAGTAGCGACTTTAGGTAACATTGTTGAAAGTGATAATGATTCAGCACCTTCTCCTATCAATACGTCAGGTGGAAAAAAACTGTCAGATTCCAAAGAACTTGTTACTATTCCTGAAATGGGATCGGCGGGACTAGATATACTTCCAGTGAACCAGAGTCACCAGAAGCCAAAGCGAACTGAGATCTCGCAACGCCGACGAATTCGTAGACCCTTTTCTGTTGCTGAAGTGGAGGCACTGGTTGAAGCAGTCGAGAGACTCGGAACTGGAAGGTGGCGTGATGTTAAACTCCGCGCGTTTGATGATGCAAAGCATAGGACATATGTGGATTTGAAGGATAAATGGAAAACATTGGTACACACAGCAAGAATATCTCCTCAACAGAGAAGAGGTGAGCCCGTCCCCCAAGAACTTTTGGATAGGGTCCTTACTGCTCATGCATATTGGTCCCAACAACAGCTCAAGCATCACCCTGAAACTTGCCTCCTCCTTTAA 2172 0.4208 MVAQKRIDYGFVGYQVPTKPRAARSTRKRDTFQTRVENNQMCAIDLLATVASGTLLHEKHNPITSSDELLKKDQRGFVKEESQDANKPFKAELPDEASCEKRLQHGFVKEGCLDMNKPLKAEFSDEGSSDRKCISTLSLQEFDLNSGLKESPRPEIDGRSCIASVLTSSSGSERLVTDTLVDVKSHSEMKNITSKVELGSSEFPDCSDCNLDVDVSIVKDELRKSEMPIGIETGTRCFKDPIDDKPPTLVVSGGNAKLSGHNDSIPRSSLLKGCDNVSVVSRDDDENKSGCAHPSSKTKAFRPKTCIGDQRIRKRLASKYRKVARESKHDTLSNNVLDRNFNTVYNGRKNSYSHQISQMNIPFKKRKIFDCSSTSNSNGNIRSGRTFYSTKNDINQGVSCSSARMRKDPGKSSLEAYHHRSALKSRDSHVKLRIKSFRVPELFIEIPETATVASLKKAVMEAVTTLLRGGLRVGMILHGKKLRDDSKTLLQTGISHDNELDALGFTLEPNASQSLPLTCAKDSLNVPNGDTPLSIIGHPSSPAVVLPIQRIQGFSDTDHQVATLGNIVESDNDSAPSPINTSGGKKLSDSKELVTIPEMGSAGLDILPVNQSHQKPKRTEISQRRRIRRPFSVAEVEALVEAVERLGTGRWRDVKLRAFDDAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQLKHHPETCLLL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07419 723 MobiDBLite consensus disorder prediction 568 588 - -
Vivi2g07419 723 SMART sant 627 680 IPR001005 -
Vivi2g07419 723 SUPERFAMILY Homeodomain-like 629 710 IPR009057 -
Vivi2g07419 723 SUPERFAMILY Ubiquitin-like 425 514 IPR029071 -
Vivi2g07419 723 CDD SANT_TRF 629 679 - -
Vivi2g07419 723 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 720 IPR031105 -
Vivi2g07419 723 MobiDBLite consensus disorder prediction 568 590 - -
Vivi2g07419 723 Gene3D - 617 719 - -
Vivi2g07419 723 ProSiteProfiles Myb-like domain profile. 623 678 IPR001005 -
Vivi2g07419 723 ProSiteProfiles Ubiquitin domain profile. 430 500 IPR000626 GO:0005515
Vivi2g07419 723 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 623 682 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07419 Vivi-Chr2 218504947 218510592 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07419 - - tpra:123897533 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07419 2 218504947 218510592 Vivi2g07419 2 218504947 218510592 ECH
Vivi2g07419 2 218504947 218510592 Vivi3g04143 3 72751515 72755719 ECH