Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03997 ATGAATGTGAGCTACTACTACCACTCTTCCCCCGCATTGGCGCATCATTCCCGCCTCTCGTGTTATGCCCCAATAACACCCACTTCTCTAACCCTCTTACACCATCATCGTCCTCTTTCTGTCTCCTTCTTCCAAAACCCTAATTTTCTCACGGGGAACACTATCTTCTTCAAGATGCAGCGATTCTGCTCTGTAAGTGGCAAAAGTAAGAACAAAGCAATGGTGGAGAGGTTGCAGCAATTTGGAGTAATCGTGTCAAGTAAGGTTGCTGAAGTGATGGAGACTGTTGACAGAGCTTTGTTTGTACCCAGTGGATCAGCGGCACCTTATGATGATAGCCCCGTGGCAATTGGCTATAATGCCACTATATCTGCACCTCATATGCATGCTACCTGCCTTCAGTTGCTGGAGGAGAATTTGCAACCTGGGATGCACGCTCTCGACGTTGGCTCTGGAACAGGGTATCTGACTGCATGTTTTGCCCTGATGGTTGGACCCCAAGGTCGTGCTGTTGGTGTGGAGCATATTCCTGAATTAGTTTCTCTTGCAAAAGAAAATATTCAAAATAGTGCTGCAGCTACACTGTTGAAAGATGGTTCCCTTTCTGTACATGCTGGTGATGGAAGGGAAGGCTGGCCAGAATTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCTGCACCAGAAATTCCCCAACCACTCATTGACCAGTTGAAACCTGGTGGGAGAATGGTGATTCCTGTTGGTAACATATTTCAAGATTTGAAAGTGGTGGATAAGAACCCTGATGGTTCTATCAGTATCCGGACTGAGACCTCCGTTCGTTATGTGCCCCTTACTAGTCGAGAAGCCCAACTTCGCGGCTACTAA 870 0.4724 MNVSYYYHSSPALAHHSRLSCYAPITPTSLTLLHHHRPLSVSFFQNPNFLTGNTIFFKMQRFCSVSGKSKNKAMVERLQQFGVIVSSKVAEVMETVDRALFVPSGSAAPYDDSPVAIGYNATISAPHMHATCLQLLEENLQPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSLAKENIQNSAAATLLKDGSLSVHAGDGREGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNPDGSISIRTETSVRYVPLTSREAQLRGY 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03997 289 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 68 287 IPR000682 GO:0004719|GO:0036211
Vivi3g03997 289 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 206 221 IPR000682 GO:0004719|GO:0036211
Vivi3g03997 289 NCBIfam protein-L-isoaspartate O-methyltransferase 68 285 IPR000682 GO:0004719|GO:0036211
Vivi3g03997 289 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 70 283 - -
Vivi3g03997 289 Gene3D Vaccinia Virus protein VP39 64 289 IPR029063 -
Vivi3g03997 289 CDD AdoMet_MTases 147 248 - -
Vivi3g03997 289 FunFam Protein-L-isoaspartate O-methyltransferase 63 289 - -
Vivi3g03997 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 259 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03997 Vivi-Chr3 69235207 69237684 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03997 K00573 - gmx:100810913 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03997 3 69235207 69237684 Vivi3g03997 3 69235207 69237684 ECH
Vivi1g02232 1 46987565 46990449 Vivi3g03997 3 69235207 69237684 PCT