Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02232 ATGGAGCAATACTGGTCTGGGAGTGCGATCAATAAAAACAAAGGGATGGTAGAGAATTTGCAGAATTGTGGAATAATCAAATCTCAAAAGGTGGTTGAAGTAATGGAAAACATTGACAGAGGTTTATTTGTACCCAATGGGGTTCAACCTTACATAGACAGCCCCTTTGCTATAGGCTATAATGCCACTATCTCTGCGCCGCACATGCATGCATCCTGCCTTCAGTTGCTGGAGAATCACTTGCAACCTGGAATGCATGCTTTGGATGTTGGCTCTGGGACTGGGTACCTGACAGCTTGCTTTGCCTTGATGGTTGGACCCAATGGCCGTACTGTCGGCGTGGAACATATTCCTGAGTTGGTTTCCTTTTCAATCAAGAATATTGAAAAAAGTGCCGCGGCTCCACTATTGAAAGATGGTTCCCTTTCTGTGCATGATGGTGATGGAAGGCAGGGTTGGCCTGAGTTTGCCCCTTATGATGCCATTCATGTCGGAGCAGCGGCACCGGAGATTCCCCAACCACTTGTTGACCAATTGAAGCCGGGTGGTCGAATGGTTATTCCTGTTGGAAACAAGTTTCAAGATTTAAAGGTTGTGGACAAGAACACCGATGGTTCTATCAGTATCCGGACTGAGACTGCTGTTCGATATGTGCCTCTCACTAGCAAGGAAGCTCAACTTAAAGGAGAATAA 693 0.4618 MEQYWSGSAINKNKGMVENLQNCGIIKSQKVVEVMENIDRGLFVPNGVQPYIDSPFAIGYNATISAPHMHASCLQLLENHLQPGMHALDVGSGTGYLTACFALMVGPNGRTVGVEHIPELVSFSIKNIEKSAAAPLLKDGSLSVHDGDGRQGWPEFAPYDAIHVGAAAPEIPQPLVDQLKPGGRMVIPVGNKFQDLKVVDKNTDGSISIRTETAVRYVPLTSKEAQLKGE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02232 230 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 224 - -
Vivi1g02232 230 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 227 IPR000682 GO:0004719|GO:0036211
Vivi1g02232 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 13 199 IPR029063 -
Vivi1g02232 230 Gene3D Vaccinia Virus protein VP39 5 229 IPR029063 -
Vivi1g02232 230 FunFam Protein-L-isoaspartate O-methyltransferase 4 230 - -
Vivi1g02232 230 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 147 162 IPR000682 GO:0004719|GO:0036211
Vivi1g02232 230 NCBIfam protein-L-isoaspartate O-methyltransferase 12 226 IPR000682 GO:0004719|GO:0036211
Vivi1g02232 230 CDD AdoMet_MTases 88 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02232 Vivi-Chr1 46987565 46990449 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02232 K00573 - gmx:100527082 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02232 1 46987565 46990449 Vivi1g02232 1 46987565 46990449 ECH
Vivi1g02232 1 46987565 46990449 Vivi3g03997 3 69235207 69237684 PCT