Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03975 ATGGTGCCTGCTGCCGGGGTTGGCGCTGCACAGCCTCTTTTTTCATTTGGATTGATTTCTGATGTCCAATATGCTGACATTCCTGATGGTCGCTCATTCCTTGGTGTTCCTCGGTATTATAAGCATAGTATTCTTATTTTGCAGAGAGCAGTTAAAGAATGGAATACTCATCAGAAGCATAAGTTTGTGATTAATTTTGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTATTAATGCTGTAAAAAAAGTTGTGGATGAATTTGAAATGTTTAGGGGACCCGTGTATCATATGATTGGAAATCACTGTTTGTACAATCTTCCTCGAAGCAAGTTACTTCCATTATTGAAGATCCAAACCCTTGATGGTTGTGCTTACTATGATTTCTCACCAGTGCCGGAATATAGATTTGTAGTTCTGGATAGCTATGACATCAGTGCCATTGGGTGGCCTCAAGATCATCCAAAAACATTAGAGGCCTTGAAATTGCTAAGAGAGAAGAATCCAAATGAAGATAAGAACAGTCCAACAAACTTGGAGGGGCTTGACAGAAGGTTTCTTATGTTTAATGGAGGTATCGGAAAGGAACAAATGGAATGGTTTGACGGTGTTCTCCAAAATGCAACCGAATTGAAACAGAAGGTTGTTGTCTCTTCCCATCTGCCTCTAGATCCTTGTGCTACATCCAAGGAGGCGCTGTTGTGGAATTGTGATGAAGTGATGAATTTGATACACAAATACAAATGTGTTAAGGTCATTTTTGCTGGACATGATCATAAAGGTGGGTACTCCATTGATTCTCACGGGGTACACCATCGAGTTTTTGAAGCTGCGCTTGAATGTCCTCCGGGTACAGATGCATTTGGAAGCGTTTATGTCTATGATGACAGGATATCACTTGTAGGAACTGACAGAATGGCGAGCACAGACATGCATTTTAATCCTCAATAA 957 0.4054 MVPAAGVGAAQPLFSFGLISDVQYADIPDGRSFLGVPRYYKHSILILQRAVKEWNTHQKHKFVINFGDIVDGFCPKDQSINAVKKVVDEFEMFRGPVYHMIGNHCLYNLPRSKLLPLLKIQTLDGCAYYDFSPVPEYRFVVLDSYDISAIGWPQDHPKTLEALKLLREKNPNEDKNSPTNLEGLDRRFLMFNGGIGKEQMEWFDGVLQNATELKQKVVVSSHLPLDPCATSKEALLWNCDEVMNLIHKYKCVKVIFAGHDHKGGYSIDSHGVHHRVFEAALECPPGTDAFGSVYVYDDRISLVGTDRMASTDMHFNPQ 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03975 318 SUPERFAMILY Metallo-dependent phosphatases 12 314 IPR029052 -
Vivi3g03975 318 CDD MPP_Nbla03831 14 302 IPR041869 -
Vivi3g03975 318 PANTHER - 8 316 - -
Vivi3g03975 318 Pfam Calcineurin-like phosphoesterase 15 262 IPR004843 GO:0016787
Vivi3g03975 318 Gene3D - 9 308 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03975 Vivi-Chr3 68972796 68975399 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03975 K01517 - gmx:100792911 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03975 3 68972796 68975399 Vivi3g03975 3 68972796 68975399 ECH
Vivi3g03975 3 68972796 68975399 Vivi1g02201 1 46168469 46170026 PCT