Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02201 ATGTGCTTGTGGAGATTAGATAGAAAGAATAACATCATGGGTTCTGAAAATTGGATGAAAAGTGCACATGATCAAAAACAACCTCTCTTTTCGTTCGGATTGATATCCGATGTGCAATATGGTGATATTCCGGATGGTCATTCGTTCCTCGGGGTTCCTCGTTACTATAGGCATAGTCTTCTTGTGTTACAAAGAGCAGTTCAGAGTTGGAATAATCATAAGAGGCATAAATTTGTTATAAATTGTGGAGATATTGTTGACGGGTTTTGTCCGAAAGATCAATCTTTTGATACTGTAAAGAAAATTTCCGGTGAATTTGAGAAATTCCAAGGACAGGTACATCATTTAATTGGAAATCACTGTCTATATAATCTACCTCGCAACAAGTTGCTTCCGTTGTTGAAGATTCGTAGTCCAGAAGGCCATGGTTACTACGATTTTTCGCCTGTGCCTGAATATAGATTTGTTTTCCTCGACGGATATGATATAAGTGCGATTGGTTGGCCTCGTGATCATCCGAGAACATTGGAAGCTATGAGATTACTCAGGGAGAAGAATCCGAATGAAGATAAGAATAGTCCAACCGGTTTAGTTGGACTTGAAAGAAGGTTTCTTATGTTCAACGGAGGCGTTGGAAAGGAACAAATGGAATGGTTGAATAATGTTCTTCAAGATGCAACGAAATCGAAACAGAAAGTCGTGGTTTGTTGTCATATGCCTCTAGATCCTGTCGCGTCGTCTAAGGAAGCATTGTTGTGGAATTATGATGAAGTGATGAGTTTGATACATAGATATAGTTGTGTGAAGGTTTGTTTTTATGGTCATGATCATAAAGGTGGATACTCCATTGATTCACATGGTATTCATCATAGAATTCTTGAAGCTGCATTGGAATGTCCTCCTGGTAGAGATGCATTTGGATATGTTGAAGCTTATCATGACAGAATATCACTTTATGGCACTGACAGAATGCCAAGTACAAATATGTATTTTAATAATGTTTAG 1005 0.3801 MCLWRLDRKNNIMGSENWMKSAHDQKQPLFSFGLISDVQYGDIPDGHSFLGVPRYYRHSLLVLQRAVQSWNNHKRHKFVINCGDIVDGFCPKDQSFDTVKKISGEFEKFQGQVHHLIGNHCLYNLPRNKLLPLLKIRSPEGHGYYDFSPVPEYRFVFLDGYDISAIGWPRDHPRTLEAMRLLREKNPNEDKNSPTGLVGLERRFLMFNGGVGKEQMEWLNNVLQDATKSKQKVVVCCHMPLDPVASSKEALLWNYDEVMSLIHRYSCVKVCFYGHDHKGGYSIDSHGIHHRILEAALECPPGRDAFGYVEAYHDRISLYGTDRMPSTNMYFNNV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02201 334 CDD MPP_Nbla03831 30 318 IPR041869 -
Vivi1g02201 334 PANTHER - 20 332 - -
Vivi1g02201 334 Gene3D - 25 324 IPR029052 -
Vivi1g02201 334 Pfam Calcineurin-like phosphoesterase 31 278 IPR004843 GO:0016787
Vivi1g02201 334 SUPERFAMILY Metallo-dependent phosphatases 28 327 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02201 Vivi-Chr1 46168469 46170026 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02201 K01517 - gmx:100780293 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g02201 1 46168469 46170026 Vivi1g02201 1 46168469 46170026 ECH
Vivi1g02201 1 46168469 46170026 Vivi3g03976 3 68972796 68975127 PCT
Vivi3g03975 3 68972796 68975399 Vivi1g02201 1 46168469 46170026 PCT