Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03972 ATGCAAGACTCAATTGGAATTCCTGCATGTTTCTCTTCAACAAGTGATGATGATCATCATCCTCATCATGGAGCTGTGACACGTTCAGGTAGAACCGTTTACATGTCAGTATACCGAACAAAGTTAGCTGATCAATGCCGTTTGATCACAATCACATGGTGCAAAAACCTGATGCTCCATGGTTTATCAGTATCAGTGGAAAACCCCGAGAAGGAAACTCAATATAGCTGCAAAGTTGAGCTAAAGCCATGGTACTTCTGGAGGAAACAAGGCTCGAAACGATTCGCGGTAGATGGAAAAGAAGTTGATGTTTTCTGGGACCTTAAATCTGCGAAATTCAACGGCGAAACGGAACCAACTTCAGAATACTACGTAGCAGTTGTTTGTGATAAACAAGTTGTGTTGCTTGTTGGTGATTTAAAGAAAGAAGCTTACAAAAAAACTGGGTGTAGACCATCACTCATTGATCCAATTCTCGTTTCGAAAAAGGAACATATATTCGGAAAGAGAAAATTCTCAACTAAAGCTAAGTTTCATGAGAAAGATAGGTGTCATGAGATTTGTATAAAGTGTAAGAACAAAGGTAATATGAATGTTGTTGGAGTTGGAGATGGAGATTCTGAAGTAAGTGGTGGTGTTAAAGTTAAAGTTAAAGTTGAACCAGAGATGGAGATAAGATTTGATGGAGAGTTGATGATTCATGTGAAGCATTTGCAATGGAAATTTAGAGGGAATGAATCGGTTTATCTAAACAAAACAAGAGTTGAGGTATATTGGGATGTTCATGATTGGTTATTTAGTCCTGGTTTGAAACATGCTTTGTTTATTTTTAAGCCTGTTTTTTCATGTAGTAATTCTTTGTCACCAGTGTCTTTGTTTTCACCATCTTTGTCTTGTTCATCTTCCTCCACTACTCCATTATCAAACCAGAGAAGTAGTAACAGCAATAGTACTTGTGAGTCATTGGAGGGTCATGGTGGCAGTGATTCATCATCATCAGAGTTTTGTTTGTTTCTATATGCTTGGAAGGTTGAATGA 1038 0.3776 MQDSIGIPACFSSTSDDDHHPHHGAVTRSGRTVYMSVYRTKLADQCRLITITWCKNLMLHGLSVSVENPEKETQYSCKVELKPWYFWRKQGSKRFAVDGKEVDVFWDLKSAKFNGETEPTSEYYVAVVCDKQVVLLVGDLKKEAYKKTGCRPSLIDPILVSKKEHIFGKRKFSTKAKFHEKDRCHEICIKCKNKGNMNVVGVGDGDSEVSGGVKVKVKVEPEMEIRFDGELMIHVKHLQWKFRGNESVYLNKTRVEVYWDVHDWLFSPGLKHALFIFKPVFSCSNSLSPVSLFSPSLSCSSSSTTPLSNQRSSNSNSTCESLEGHGGSDSSSSEFCLFLYAWKVE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03972 345 Pfam Plant protein of unknown function (DUF868) 31 343 IPR008586 -
Vivi3g03972 345 MobiDBLite consensus disorder prediction 303 332 - -
Vivi3g03972 345 PANTHER EXPRESSED PROTEIN 7 343 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03972 Vivi-Chr3 68930138 68931840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03972 7 345 EF-hand Containing Proteins AT5G28150 36.337 1.14e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03972 - - gmx:100779755 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03972 3 68930138 68931840 Vivi3g03972 3 68930138 68931840 ECH
Vivi1g02196 1 46137752 46139386 Vivi3g03972 3 68930138 68931840 PCT