Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03412 ATGGTAGATGAGAGTGGTTTGATCATGTTTCCAATGGAGAAGAGAGCGTTGGAGTGTGTTGGTAAAGGCTTTGATCTAACAAGTGATTTTCGAATGAAATTCGCGAAAGGATTGATGAATGGTGGAAGGTTAGTGGTGGTTGATGAATTAAACAAGAGAGATGTTATTGTCCCTGGTGGAGTTATCATTCCAGATGTTTCCGAGGATATTCGGTTCGACAGAGGTGATCGCGTTCGGTTCAAATCCGATGTTCTTCCATTCAATCAGATGTCTGAAATGGTTAATCAGAAATCAGCTATACCAGGAAAAATTCCTTCGGGCTATTTCAACGCGGTATTTGATTTGAGTGGCGATTGGTTTCGAGATGCGCAAGAGATTAAATCTCTTGCTTTTGATGGTTACTTCATTTCTCTTTACTATTTGCACTTAACTGCTTCACACCTGAAGCTTCAAGAGGAAGTTAAAAAGTCTGTTCCAGCACAGTGGGATCCAGCTTCTTTGTCCAGGTTTATTGTGACATATGGTACACACATAATAGTAGGCATGGGTGTTGGAGGACAAGATGTAATATGTGTCAAACAAAAACATTCTTCGAAGGTTCCTCCGGGTGATCTCAGAAGACATTTAGACGATTTAGGCGATTTTTTATTTTCAGATTTAAGAAGCCCTTCTCTACTCGACAGGAAGACGACAATAGAAGACAAACAAAAAGTCCCAGAAGTTTTTAACCGTGTGATGCAATCAAGCACGACGCAGTTTACAAGTATTTCAGAAACATCAAGCAAAGATGGCCTCACTGTTATTTGCTCAAAAAGAGGAGGAGATGTGTTTAAGCACAATCATTCAAGTTGGCTCCAAACAATGGCTTCTAGTCCTGAAGCAATCCATTTCAAATTTGTTCCTATTTCATCACTTCTCACCGGAATTCCTGGAAGCGGCTATCTTAGTCATGCAATCAATTTGTATTTAAGATATAAGCCCTCTACGGAAGACTTACAATATTTCTTGGAGTTTCAAATTCCCAGGGAATGGGCACCCATGTTTTCTGAGCTTCCTCTGAGGCATCAAAGGAAAAAACCTCATTCTCCTCCACTGCAATTTAGTTTCATGTCTCCAAAACTTCATATCAACTCTACACAGGTAGTAAGTGAACAAAAACCCGTGGTTGGCCTCCGATTATACTTGGAGGGAAGGAAATGTGATAAACTTGCAATACATATACATCATCTCTCAAGCCTCCCAAATACAATGGAACTCTCTTCAACTACTACTAGTACACCTATGTGGCGAGGATCCGACAATGATGAATCGAGTAACCAATTCGCGGAACCAATAAGATGCAAGAGATTCGCGCACGTCTGCACCTCAGTGGTTAAGTATGACCCTAACTGGTTGCAAGAATCGAATTCAACAGGTGTTTATATCGTGACCGGTGCTCAACTCATTAGCAAAGGGAATTGGCCAAAGAATATGCTTCATTTGCGCCTTCTCTACACTCACATACCGAATTGCAGCATCAGGAAAACCGAATGGGCTTCTGCGCCAGAAGCTTCGAGAAAATCGTCTTTCTTCACAAATCTGAGCACAACATTTTCATTCACACAACAAAGTGTTACTGCCACACAGAAACAGGCTGCTCCAACTGCACTTAACTCTGGTGTTTATCCGGATGGTCCGCCCGTGCCTGTTCGTTCTGCTAAAATGCTTAAATATGTGGAGACGAGCGAGGTTTTGCGCGGTCCACATGATGCTCCCGGGCATTGGTTGGTAATTGCTGCTAAGCTTGTGACTGAAGGTGGCAAAATTGGATTACAGGTAAAGTTTGCATTGTTAGATTACTAG 1842 0.4186 MVDESGLIMFPMEKRALECVGKGFDLTSDFRMKFAKGLMNGGRLVVVDELNKRDVIVPGGVIIPDVSEDIRFDRGDRVRFKSDVLPFNQMSEMVNQKSAIPGKIPSGYFNAVFDLSGDWFRDAQEIKSLAFDGYFISLYYLHLTASHLKLQEEVKKSVPAQWDPASLSRFIVTYGTHIIVGMGVGGQDVICVKQKHSSKVPPGDLRRHLDDLGDFLFSDLRSPSLLDRKTTIEDKQKVPEVFNRVMQSSTTQFTSISETSSKDGLTVICSKRGGDVFKHNHSSWLQTMASSPEAIHFKFVPISSLLTGIPGSGYLSHAINLYLRYKPSTEDLQYFLEFQIPREWAPMFSELPLRHQRKKPHSPPLQFSFMSPKLHINSTQVVSEQKPVVGLRLYLEGRKCDKLAIHIHHLSSLPNTMELSSTTTSTPMWRGSDNDESSNQFAEPIRCKRFAHVCTSVVKYDPNWLQESNSTGVYIVTGAQLISKGNWPKNMLHLRLLYTHIPNCSIRKTEWASAPEASRKSSFFTNLSTTFSFTQQSVTATQKQAAPTALNSGVYPDGPPVPVRSAKMLKYVETSEVLRGPHDAPGHWLVIAAKLVTEGGKIGLQVKFALLDY 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03412 613 SMART MACPF_8 126 324 IPR020864 -
Vivi3g03412 613 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 3 336 IPR020864 -
Vivi3g03412 613 Pfam MAC/Perforin domain 109 322 IPR020864 -
Vivi3g03412 613 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 13 613 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03412 Vivi-Chr3 57312091 57315144 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03412 - - vvo:131655839 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03412 3 57312091 57315144 Vivi5g05538 5 158349488 158353877 PCT