Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03405 ATGTTTAACTGGGGGTCTATTGTTGTGACCGTGATGCTGTTTGTTCTGTTGACGCCGGGGCTGCTGTTTCAGGTTCCAGGGCGTTCGAGGTGCATCGAGTTTGGAAACTTTCAGACAAGTGCTGCTGCCATTGTTGTTCATTCTCTCCTCTATTTTGGTCTTGTTTGCTTATTCTTGATTGCTGTTAGGGTCCACTTTTACATAGACTAG 210 0.4571 MFNWGSIVVTVMLFVLLTPGLLFQVPGRSRCIEFGNFQTSAAAIVVHSLLYFGLVCLFLIAVRVHFYID 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03405 69 PANTHER OS05G0103400 PROTEIN 1 68 IPR021775 -
Vivi3g03405 69 Pfam Protein of unknown function (DUF3339) 1 67 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03405 Vivi-Chr3 57236605 57236934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03405 - - tpra:123904908 139.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03405 3 57236605 57236934 Vivi5g05556 5 158637952 158643991 PCT