Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03383 ATGAAGAACCGTTATCCACTCCAACAGAGAAAGCTATTAATCGGATTAGCCATCATTGGATTAATCGGAGCACTACTATTCATCGCCACCGCAATCACCGCCTCCGACACATCCTCATTACACTGTCCAATCTCAACCGGAATCCGAGCCAGATCAAACGACGACAGTAACAACAACCCAACACCGATCCAGCTCCAATCAATACTCCACTACGCCACCTCCCGCGTCGTCCCTCAACAATCCGTCTCCGAGATCAAGATCAGTTTCGATGTATTGAAATCCTACAACCGTCCCTGCAACTTTCTCGTCTTCGGACTCGGCCACGATTCTCTCATGTGGGCCTCGTTTAACCCAGGTGGCCACACGCTCTTCCTCGAAGAAGATCCTCGATGGGTTCAAACCGTTCTCAAAGACGCTCCGGGCCTCCGGGCTCATACCGTCCGTTACCGAACGCAGCTCCGTGAAGCCCACAAGCTCATCATATCGTACCGCGCTGAGCCCATGTGCTCTCCTTCTAAAGCCTTCCTACGTGGCAACAAAGCTTGTAAGCTCGCGCTGGAGAATCTACCGGATGAAGTTTACGAGACGGAGTGGGACCTTATCATGGTCGACGCGCCTAAAGGGTACTACGCGGAGGCGCCGGGACGTATGGCCGCCGTGTTCTCCGCTGCTGTTATGGCGAGGAATAGAAAGGGATCTGGTGTGACGCATGTTTTTCTGCATGATGTGGATCGTAAAGTGGAGAAAGCTTATGCTGAAGAGTTTCTTTGTAAGAAGAACATGGTTAAAGGTGCTGGGAGGCTTTGGCACTTCAAGATACCACCGTCAAACAACACCGATGATACTCGTTTCTGTTAA 858 0.5128 MKNRYPLQQRKLLIGLAIIGLIGALLFIATAITASDTSSLHCPISTGIRARSNDDSNNNPTPIQLQSILHYATSRVVPQQSVSEIKISFDVLKSYNRPCNFLVFGLGHDSLMWASFNPGGHTLFLEEDPRWVQTVLKDAPGLRAHTVRYRTQLREAHKLIISYRAEPMCSPSKAFLRGNKACKLALENLPDEVYETEWDLIMVDAPKGYYAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRKVEKAYAEEFLCKKNMVKGAGRLWHFKIPPSNNTDDTRFC 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03383 285 PANTHER OS11G0490100 PROTEIN 9 285 IPR006514 GO:0045492
Vivi3g03383 285 Gene3D Vaccinia Virus protein VP39 76 283 IPR029063 -
Vivi3g03383 285 Pfam Polysaccharide biosynthesis 84 271 - -
Vivi3g03383 285 NCBIfam TIGR01627 domain 66 285 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03383 Vivi-Chr3 56877143 56878709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03383 - - gmx:100791951 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03383 3 56877143 56878709 Vivi5g05564 5 158740319 158741505 PCT