Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03376 ATGCGAACCAGAAGAGGCTTGTGTTATCCTCAAACACTTCCACTTCCAAACATGTCTTCAAACACCCACAAACGACAGAAGAGAATGCCGGAAAATACCACCGGCGGTTCCGATTTCTTTGACTATTTACCTGACGATATTGTCTTGTCTATCCTCGGTAAACTTAGCTCTACCGCTACCTCCCCCTCCGATTTCATCAGTGTTCTAATCACGTGCAAGAGACTAAACGCTTTAGGTCTTAACTCTCTTGTTCTGTCGAAAGCATCGAGCAAAACATTATCAGTTAAAGCTAAAAACTGGTGCGACTCTGCTCACCGTTTCCTCAAACGTTGTGCAGACGCTGGAAACATTGAAGCGTGTTACACTCTCGGAATGATTCGGTTTTACTGTTTGCAAAACAGAGGAAGCGGCGCTTCGATGATGGCAAAAGCAGCTATGAAATCTCACGCGCCGTCGCTGTACTCGTTAGCTGTTATACAGTTTAACGGAAGTGGTGGAACGAAAAATGACAAGGATTTACGCGCTGGTGTGGCTCTGTGTGCACGCGCTGCGTTCCTTGGTCATATCGATGGGTTACGTGAGCTTGGCCATTGTTTACAAGACGGTTACGGTGCTAAACAGAACGTTATAGAGGGACGGCGGTTTCTAGTTCAAGCTAACGCCCGTGAACTTGCTGCTGTTTTATCTAACGGAAACAGTAAACATCCGTTAATGAGGTGGAGTGTTAACCCGGTTAAGAACCAGCCACCTCAGATTCCTGTCGTTTCTGGTTCGGGTTCGGGTTGTCCGTTGCTGAGTGATTTTGGTTGTAATGTTCCGGTCCAGGAAGCTCACACTGCGAACCGGTTTTTAACGGAGTGGTTTGAAAACCGGGGCGGGTTTCCGGGTCAAGGTATGATGCTGTGTTCGAATACGGGTTGCGGCCGGCCAGAGACAAGGAAGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGTGGTGAATTATTGCTCCCGCGCCTGTCAAGCGCTTGACTGGAAGTTTCGACATAAGGGGGAGTGTGCGCCGGTTGAGAGGTGGTTAGACGAGGCGGGGCAACCTGTTGCCGTTGAGGGTGTGGGTAACGGTGACGGAGGCGTTAACGTTGAAGAAGTTGATAGGTAG 1140 0.4912 MRTRRGLCYPQTLPLPNMSSNTHKRQKRMPENTTGGSDFFDYLPDDIVLSILGKLSSTATSPSDFISVLITCKRLNALGLNSLVLSKASSKTLSVKAKNWCDSAHRFLKRCADAGNIEACYTLGMIRFYCLQNRGSGASMMAKAAMKSHAPSLYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDGLRELGHCLQDGYGAKQNVIEGRRFLVQANARELAAVLSNGNSKHPLMRWSVNPVKNQPPQIPVVSGSGSGCPLLSDFGCNVPVQEAHTANRFLTEWFENRGGFPGQGMMLCSNTGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKFRHKGECAPVERWLDEAGQPVAVEGVGNGDGGVNVEEVDR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03376 379 PANTHER MYND DOMAIN-CONTAINING 1 361 IPR044508 -
Vivi3g03376 379 SUPERFAMILY F-box domain 27 84 IPR036047 GO:0005515
Vivi3g03376 379 Pfam MYND finger 307 346 IPR002893 -
Vivi3g03376 379 Gene3D Tetratricopeptide repeat domain 93 247 IPR011990 GO:0005515
Vivi3g03376 379 Gene3D - 295 350 - -
Vivi3g03376 379 ProSiteProfiles Zinc finger MYND-type profile. 304 346 IPR002893 -
Vivi3g03376 379 FunFam Predicted protein 294 351 - -
Vivi3g03376 379 SUPERFAMILY HIT/MYND zinc finger-like 302 351 - -
Vivi3g03376 379 SUPERFAMILY HCP-like 101 219 - -
Vivi3g03376 379 CDD F-box_SF 43 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03376 Vivi-Chr3 56767356 56769728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03376 - - gmx:100798136 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03376 3 56767356 56769728 Vivi5g05566 5 158804675 158807949 PCT