Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03362 ATGCCTGGCTTTATTGTTGGAAAAAAGAGATTTATAAAGTCAAATATGTGTTTCACCGATTTGGTCAGTCAAGATAAGTCAACTCACACACAAAGCAAAAGCAATCATAGTTTAACCGGTGAGACTCTGGAGAAAGATTATAGTCCTATTCTACCTGGGCTGCCGGATGATGTTGCAAAACATTGTCTTGCACTTGTTCCCCGTTCCAACTTCCCTTCCATGGGTGGTGTCTGTAAGAAATGGAGGTTGTTTATTCGAAGCAAAGAATTTGTAATGGTGCGAAAATTGGCAGGATTGCTTGAGGAATGGCTCTATTTCTTGACAATGGACAGCGAAGGGAAGGAAAGCCACTGGGAGGTCATAGATAATCTCAATCATAAATGTCTATCCCTTCCACCAATGCCTGGTCCAGGAAAGGCTTCGTTTGGGGTTGTGGTTCTCAATGGAAAGCTTCTTATCATGGCTGGTTATTCAGCTGTTGACGGAACCGCTGTTGCATCATCAGAGGTTTACCAATATGACTCTTACCTTAACAGTTGGAGCAGATTATCAAACATGAATGTGGCTCGTTATGACTTCGCTTGTGCCGAAGTGAACGGCTTGGTTTATATTGCTGGAGGCTATGGAGTGAATGGGGACAGTCTCTCTAGTGTTGAGATGTATGATCCAGAAACTGATAAATGGATCCTGATAGAGAGTCTTCGTCGTCCAAGGTGGGGTTGCTTTGCCTGTGGATTAGAAGGTAAGCTCTATGTCATGGGTGGAAGGTCAAGCTTTACTATTGGAAACTCGAAGTCCGTCGATATATATAACCCCGAAAAGCACAGCTGGTGCGACATTAAGAATGGCTGTGTTATGGTCACAGCTCATGCAGTATTGGAAAAGAAGTTATTCTGTATTGAGTGGAAGAACCAGCGGAGGCTGGCAATATTCAGTCCAGAAAACAACTCATGGACAATGGTACCTGTCCCATTAACCGGGAGCTCGAGTGTTGGCTTTCGATTCGGCATACTAGACGGAAAGCTGTTGCTATTTCCAGTTGAAAAAGAACGTACTAATCAAACACTGTTATATGATCCAAATGCAGCTTTGGGATCAGAATGGCAAACTTCAGACATAAGGCCATCTGGTATGTGTTTATGCAGCGTAACAATCAAGGCATGA 1164 0.4338 MPGFIVGKKRFIKSNMCFTDLVSQDKSTHTQSKSNHSLTGETLEKDYSPILPGLPDDVAKHCLALVPRSNFPSMGGVCKKWRLFIRSKEFVMVRKLAGLLEEWLYFLTMDSEGKESHWEVIDNLNHKCLSLPPMPGPGKASFGVVVLNGKLLIMAGYSAVDGTAVASSEVYQYDSYLNSWSRLSNMNVARYDFACAEVNGLVYIAGGYGVNGDSLSSVEMYDPETDKWILIESLRRPRWGCFACGLEGKLYVMGGRSSFTIGNSKSVDIYNPEKHSWCDIKNGCVMVTAHAVLEKKLFCIEWKNQRRLAIFSPENNSWTMVPVPLTGSSSVGFRFGILDGKLLLFPVEKERTNQTLLYDPNAALGSEWQTSDIRPSGMCLCSVTIKA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03362 387 Gene3D - 89 385 IPR015915 GO:0005515
Vivi3g03362 387 SMART kelc_smart 249 297 IPR006652 GO:0005515
Vivi3g03362 387 SMART kelc_smart 150 200 IPR006652 GO:0005515
Vivi3g03362 387 SMART kelc_smart 201 248 IPR006652 GO:0005515
Vivi3g03362 387 PANTHER OS02G0202900 PROTEIN 8 383 IPR045887 -
Vivi3g03362 387 Pfam Kelch motif 241 280 IPR006652 GO:0005515
Vivi3g03362 387 Pfam Kelch motif 189 234 IPR006652 GO:0005515
Vivi3g03362 387 Pfam Kelch motif 140 187 IPR006652 GO:0005515
Vivi3g03362 387 Pfam F-box domain 53 90 IPR001810 GO:0005515
Vivi3g03362 387 SUPERFAMILY Kelch motif 101 362 IPR015915 GO:0005515
Vivi3g03362 387 CDD F-box_AtAFR-like 50 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03362 Vivi-Chr3 56647704 56649492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03362 54 232 Miscellaneous Gene Families AT4G33900 29.016 6.39e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03362 - - gmx:100802912 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03362 3 56647704 56649492 Vivi5g05576 5 158990556 158992403 PCT