Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02452 ATGTCGAACCTCGAGCCAGCCCCGTCGCAGACGCTGATTCGACGTCCGTCGAGAAGCGCTGCAATGACCACCTTCTCGATGGAGGTTTTCGACAATGATGTCGTGGTTCCTTCGTCACTCGCCTCGATAACACCCATTCTCCGTGTGGCTAATGAGATTGAAAGTGATCGCCCAAGGGTTGCTTATTTATGTCGATTCTATGCTTTTGAAAAGGCACATAGGTTGGATCAGAGTTCTAGCGGGCGTGGTGTGAGACAGTTTAAAACATTGTTGCTGCAACGATTGGAAAGGGACAATGCCACCAGTCTTGAATCCCGGACGAAGAAGACAGATGCCAGGGAAATCCAAGCTTATTATCAACAGTACTATGAGAATTATGTCAAAGCACTTGATCAGGGAGAGCAGGCTGACAGAGCACAGCTCGGTAAAGCTTACCAGACTGCCGGTGTGCTTTTTGAAGTGCTTTGTGCTGTCAACAAGACTGAGAAAGTTGAAGAAGTTGCTCCTGAGATTATTGCAGCGGCTAGAGATGTCCAGGAAAAGACGGAAATTTATGCACCTTTTAACATTCTTCCGTTGGATTCTGCCGGGGCTTCTCAGCCGATTATGCAGCTTGAAGAGATTAAGGCCGCTGTTTCTGCGCTATGGAATACCCGTGGCTTGAACTGGCCTAGTTCATTCGAGCAAACTCGCCAGAGAACTGGAGATTTGGATCTGCTTGATTGGCTCAGAGCCATGTTTGGGTTCCAGAAAGACAATGTCAGGAACCAGAGAGAGCATCTAATTCTTCTTCTTGCTAACAATCATATAAGGCTGCAACCTAAACCCGAGCCTCTCAACAAGCTTGATGATCGCGCAGTTAATTCAGTGATGAATGATCTCTTTAAGAATTACAAGACGTGGTGCAAATTTTTGGGACGAAAACATAGTTTACGACTTCCTCAAGGTCAGCAAGAGATACAGCAGAGGAAGTTGCTTTATATGAGCTTGTATCTTCTCATATGGGGTGAAGCCTCCAATCTTCGCTTCATGCCGGAGTGCCTATGCTACATATTTCACAATATGGCATATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAACCTTCTTATGGTGGTGATGATGAGTCATTCTTGCGCAAGGTTATAACTCCGATATACAAAGTCATTCAAACGGAAGCTGAGAAGAGTAAAAATGGGACGGCTCCTCACTCAGCCTGGTGCAATTATGATGATTTAAATGAGTATTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTTTTTAAATCTACATTTAATTTCACACAGGGAAGAAAGGGTGCTCCGGCAAAATCTGCAAGAACTGGCAAATCAAATTTTGTTGAGACCCGGTCGTTCTGGAACCTCTTCCGTACTTTTGATCGTCTCTGGACCTTTTATTTACTGGGTTTGCAGGCATTGTTCATAGTTGCATGGATAGATATTCCAGTGTTGGAAATATTTCAGAAAGATGTCTTATATAAACTCTCTAGCATATTCATCACAGCAGCCGTTCTTCGTTTCCTTCAAAGTGTTTTGGACATGACTCTGAATTTTCCCGGCTTTCATCGCTGGAGATTCACTGATGTGCTAAGAAATGTTCTCAAAATCATTGTTAGTCTTTTTTGGGTTATTGTTCTTCCATTATTATACCTGCATTCCTTCAACGGTTCTCCAGAGTTTATCAGGAAGTTGCTTTCCTTTGTTCATCAAGTGAAAGGGATTCCACCATATTATGTCTTAGCAGTTGGAGTATATTTGATCCCAAATGTACTAGCAGCCTTTCTCTTTCTTTTCCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACATATTTAGACTCCTCTTATGGTGGTCTCAGCCAAGAATCTATGTCGGACGAGGAATGCATGAGAGTCAATTTGCTCTCTTTAAGTACACTCTTTTCTGGGTGCTTCTTTTGGCTGCCAAATTTTCATTCAGCTTTTTTGTCCAGATCAAGCCTCTTGTTAAGCCAACTAAAGACATAATGAGCATTCGACGTGTTGATTTTGGCTGGCATGAGTTTTTCCCACATGCTCAAAATAATTACGGTGCAGTTGCTGCACTCTGGGCTCCTGTACTTATGGTTTATTTCATGGACACCCAAATTTGGTATTCCATCTTCTCAACTGTGTGTGGTGGTGTTCTTGGAGCCTTCGATCGTCTGGGAGAGATACGCACTCTGAGCATGCTCAGATCACGGTTTCAGTCATTACCTGGTGCATTCAACACTTACTTGGTTCCTACTGACAAGAGAAAGAAAAAGGGATTCTCTCTCTCAAAGGGATTTGCCGAGATTTCCGCAAACAGAAGGAGTGAAGCTGCTAAGTTTGCCCAATTATGGAACGAAATTATTTGCAGTTTCCGCGAGGAAGATATTATAAGTGATAGGGAGATGGACCTTTTGTTGGTTCCTTACTCATCAGATCCTAGTTTAAAAATAATTCAATGGCCGCCATTTATGCTTGCAAGCAAGATTCCTATTGCACTGGATATGGCAGCTCAATTTCGAGGAAGGGACTGTGATCTTTGGAAACGCATATGCGTAGACGAATATATGAAATGTGCGGTCATTGAAAGCTATGAAACTTTCAAACATATTTTGAGCGCGTTAGTGGTCGGAGAAGCTGAAAAAAGGACAATCTCTGTCATCCTAAAGGAAGTTGAAAACAGCATCTCTAAAAATACACTTCTTACAAATTTCCGAATGGGATTTTTGCCTTCCCTTTGCAAGAAATTTGTTGAGCTTGTTGAAATTTTGAAAGATGCAAATCTATCCAAGCGCGACACACTGGTGGTATTGTTGCAAGATATGTTAGAAGTGTTTACTCGTGATATGATGGTGAATGAAATCAGCGAATTAGCAGAACTTAATCTAAGTAGCAAGGATACCGGAAGGCAACTTTTTGCTGGTACTGATGTAAAACCGGCGGTACTCTTCCCTCCAGTTATTACATCACAATGGGAGGAACAGATTAGACGTATTCACTTACTGTTGACGGTGAAGGAATCTGCCATTGAGATTCCAACAAACCTTGAAGCACGCAGAAGGATTGCATTCTTTACGAATTCACTGTTCATGGATATGCCTCGTGCTCCTAGAGTTCGTAAAATGCTCTCGTTCAGTGTCATGACTCCATACTACAGTGAAGAGACTGTCTACTCGAAGAATGACCTTGAGGTTGAAAATGAGGATGGTGTGTCAATCATATATTACCTGCAAAAGATATACCCTGATGAGTGGAATAACTTCATGGAACGAATTGAGTGTAAGAAAGATAGTGAGGTATGGGAAAGAGATGATAATATATTGCAGCTACGCCATTGGGCCTCACTACGAGGGCAAACACTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGCGTGCTCTTAAGCTCCAGGCTTTTCTTGATATGGCTAATGAAAAGGAGATACTTGATGGATATAAAGCTGTTACTGTTCCATCCGAGGAAGATAAAAAGAGTCACAGATCACTATATGCCAGTTTAGAGGCTGTTGCTGACATGAAATTCACATACATTGCTACCTGCCAGAACTATGGAAATCAGAAGCGTAGTGGAGACCGTCGTGCAACAGACATTCTGAATTTGATGGTTAACAATCCTTCACTTCGTGTGGCATTTATTGATGAGGTTGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTATTACTCTGTATTGGTCAAAGCTGTGGACAATCATGACCAGGAAATATATCGAATTAAACTGCCAGGTCCAGCGAAGTTAGGAGAAGGGAAACCTGAAAATCAAAACCATGCAATCATTTTTACTAGAGGAGAAGCTCTTCAGGCTATCGACATGAACCAGGATAATTACTTGGAAGAAGCTTTAAAAATGCGTAACCTTTTGGAGGAATTTAACGAGGATCATGGGGTTCGCCGGCCTACAATATTAGGTGTTCGTGAGCATATCTTCACTGGCAGTGTTTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCTCTGAAGGTACGATTTCACTATGGTCATCCAGATGTTTTTGATAGAATTTTTCACATTACCCGGGGAGGAATGAGTAAGGCTTCTCGTGGCATCCACTTGAGCGAGGATATTTTTGCCGGATTCAACTCAACACTACGACGTGGGAATATTACTCATCATGAATACATTCAAGTTGGAAAGGGTAGAGATGTTGGACTCAATCAGATCTCTCTTTTTGAAGCAAAGGTGGCTTGCGGTAACGGAGAGCAAATACTAAGCAGAGATGTCTACAGGCTGGGGCATCGTTATGACTTTTTCCGCATGCTATCATTTTATTTTACGACCATCGGATTTTATACGAGCTCATTGGTTGTGGTCCTTACGACTTATGCTTTCCTATATGGCAAACTGTACCTGTCCTTAAGTGGATTTGAGGCTGCAATAGTGAAGTTTGCTAGGAGAAAGGGAGAGGATACATTAATGGCAGCAATAGCTTCACAATCAATTGTTCAAATTGGACTTCTAACAACTTTGCCCATGGTCATGGAAATTGGTCTAGAGAGAGGGTTCAGAACTGCTCTAGGTGACTTCATAATAATGCAGTTGCAGCTGGCACCTGTTTTCTTTACTTTCTCGCTTGGAACGAAAATGCACTATTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAATACAGAGCAACTGGGCGTGGATTTGTCGTTCGTCATGAAAAGTTTGCAGACAACTACAGGATGTACTCTAGGAGTCACTTTGTCAAAGGGATTGAGCTCACAATATTGCTGATCTGTTATATGATTTATGGATCAGCAACGCCTAACTCATCAGCATACGCCCTTCTGTCATGGTCAATGTGGTTTTTGGTTAGCTCTTGGTTGTTTGCTCCTTTCCTTTTCAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAGGACTGGGATGATTGGAATAAATGGATTAGTAACCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGTTGGGAGTCATGGTGGGATGAGGAACAGGAGCATATGCAGCACACTGGCTTTATAGGGCGGATTTGTGAGATTCTTCTTTCCCTGCGTTTCTTTATCTATCAGTATGGGATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGGGTATCATGGTTTATGCTCTGTCCTGGATAGTAATACTAGCTGTTATGGTTATCTTGAAGATTGTGTCCATGGGTAGAAAGAGGTTCAGCGCAGATTTCCAGTTGATGTTCCGTCTTCTCAAATTGTTTCTGTTTATTGGAGGCGTTGTCTGCCTGGCCCTGATGTTTACTCTGCTTAGCCTCACTGTCGGAGACATCTTTGCCAGCCTTTTGGCCTTTTTGCCAACGGCATGGGCAATTATACAGATAGCACAAGCATGCAAGCCATTGGTGAAAGGCATTGGAATGTGGGGGTCTGTTAAAGCTTTAGCTAGGGGCTACGAGTACCTAATGGCTGTGGTTATATTTACACCAGTGGCCATATTGGCATGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTTCTGTTCAACCAAGCATTCAGCAGAGGACTTCAAATCCAGCGCATTCTGGCCGGTGGCAAGAAACATAAGCAAAACTGA 5760 0.4266 MSNLEPAPSQTLIRRPSRSAAMTTFSMEVFDNDVVVPSSLASITPILRVANEIESDRPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNATSLESRTKKTDAREIQAYYQQYYENYVKALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQPIMQLEEIKAAVSALWNTRGLNWPSSFEQTRQRTGDLDLLDWLRAMFGFQKDNVRNQREHLILLLANNHIRLQPKPEPLNKLDDRAVNSVMNDLFKNYKTWCKFLGRKHSLRLPQGQQEIQQRKLLYMSLYLLIWGEASNLRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDESFLRKVITPIYKVIQTEAEKSKNGTAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFKSTFNFTQGRKGAPAKSARTGKSNFVETRSFWNLFRTFDRLWTFYLLGLQALFIVAWIDIPVLEIFQKDVLYKLSSIFITAAVLRFLQSVLDMTLNFPGFHRWRFTDVLRNVLKIIVSLFWVIVLPLLYLHSFNGSPEFIRKLLSFVHQVKGIPPYYVLAVGVYLIPNVLAAFLFLFPMLRRWIENSDWHIFRLLLWWSQPRIYVGRGMHESQFALFKYTLFWVLLLAAKFSFSFFVQIKPLVKPTKDIMSIRRVDFGWHEFFPHAQNNYGAVAALWAPVLMVYFMDTQIWYSIFSTVCGGVLGAFDRLGEIRTLSMLRSRFQSLPGAFNTYLVPTDKRKKKGFSLSKGFAEISANRRSEAAKFAQLWNEIICSFREEDIISDREMDLLLVPYSSDPSLKIIQWPPFMLASKIPIALDMAAQFRGRDCDLWKRICVDEYMKCAVIESYETFKHILSALVVGEAEKRTISVILKEVENSISKNTLLTNFRMGFLPSLCKKFVELVEILKDANLSKRDTLVVLLQDMLEVFTRDMMVNEISELAELNLSSKDTGRQLFAGTDVKPAVLFPPVITSQWEEQIRRIHLLLTVKESAIEIPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERIECKKDSEVWERDDNILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEKEILDGYKAVTVPSEEDKKSHRSLYASLEAVADMKFTYIATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAFIDEVEEREGGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGMSKASRGIHLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDVYRLGHRYDFFRMLSFYFTTIGFYTSSLVVVLTTYAFLYGKLYLSLSGFEAAIVKFARRKGEDTLMAAIASQSIVQIGLLTTLPMVMEIGLERGFRTALGDFIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFADNYRMYSRSHFVKGIELTILLICYMIYGSATPNSSAYALLSWSMWFLVSSWLFAPFLFNPSGFEWQKIVEDWDDWNKWISNRGGIGVPSNKSWESWWDEEQEHMQHTGFIGRICEILLSLRFFIYQYGIVYHLNVARGDKGIMVYALSWIVILAVMVILKIVSMGRKRFSADFQLMFRLLKLFLFIGGVVCLALMFTLLSLTVGDIFASLLAFLPTAWAIIQIAQACKPLVKGIGMWGSVKALARGYEYLMAVVIFTPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHKQN 1919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02452 1919 FunFam callose synthase 3 27 185 - -
Vivi3g02452 1919 Pfam Vta1 like 42 170 IPR039431 -
Vivi3g02452 1919 Gene3D - 29 190 IPR023175 -
Vivi3g02452 1919 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 922 935 IPR004838 GO:0003824|GO:0009058|GO:0030170
Vivi3g02452 1919 Pfam 1,3-beta-glucan synthase component 1039 1732 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vivi3g02452 1919 SMART FKS1_dom1_2 322 438 IPR026899 -
Vivi3g02452 1919 Coils Coil 1315 1335 - -
Vivi3g02452 1919 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 324 435 IPR026899 -
Vivi3g02452 1919 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 102 1912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02452 Vivi-Chr3 41175749 41189900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02452 5 1919 Glycosyltransferase AT1G05570 60.184 0.0 2392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02452 K11000 - gmx:100779472 3304.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02452 3 41175749 41189900 Vivi3g02452 3 41175749 41189900 ECH
Vivi5g04466 5 142601441 142609628 Vivi3g02452 3 41175749 41189900 PCT