Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02335 ATGGCAGCTGAGTTAGTCAACGCTGCAACAAGCGACAAATTATCTGAAACTGATTGGGCAAGAAATATTGAAATATGTGAGCTGGTTGCACGTGATAAAAGGCAAGCTAGAGATGTTGTTAAAGCTATCAAGAAGAAACTCGGAAGCAAACACCCAAACACTCAACTTTATGCTGTCACGTTGCTGGAAATGTTGATGAACAATACTGGAGAGCATATTCATGAGCAAGTGATTGATATCGGAATTATTCCTATTATTGTGAAAATCGTGAAGAAAAAGTCTGATTTGCCTGTGAGAGAAAGGATATTTCTCCTACTAGATGCCACACAATCATCCCTTGGCGGTGCTTCTGGAAAATTTCCTCAGTATTATCATGCATATTATGATTTGGTGAATGCCGGAGTGCAGTTTCCTCAAAGTGCTCAAGTGGTCGAATCAAATCATGCTAGTTCACAACCTAGTAGTACTGGTAGTATACCAAACCGGGAACAGGCTCCACCTAGACATGAAGCGGTTGTTGTACCACAAGCAGAGTCCAAGACAGTTCCTGAATCTAGCATCATTCAAAAGGCTGGTAATGCATTGGAAGTTTTAAAAGAAGTCCTTGACGCTGTTGATGCTCAGCATCCTCAGGGAGCAAGTGATGAATTCACCCTTGACCTTGTAGAACAATGTTCATTTCAGAAGCAAAGGGTAATGCATCTTGTGATGGCTTCTCGAGATGAGAGGACAGTTTCTCGAGCAATTGAACTAAACGAACAGCTTCAGAAAGTTCTTGCAAGACACGATGACCTTGTTTCTGGCAGAACTACAACAACAACTGCTAATGAACCGGTTCCAAAAGTTCTTCCAAGACACGATGACGTTGTATCCGGAAGAGTTACAACAACTTCTAATGAACAGTTTCCAAAAGTTCTTCCAAGACGTGGTGATCTTGTTTCTGGCAGAGTTACGACAAATGCTAATGAACAACTTCCAAAAGTTCTTCCGAAACGCGATGATGTTGTATCTGGCAGAGCTACAGCAACTGTTGCTACTCATTTCGACCTCGATGAATCAGAGGAGGAAGAAGAGCCTGAACAGTTAGTGCGAAGATTACGCAAAGGAAAGGCTTGTGCAAGACCTGAAGATGAACAAACTGAAAAGGACATCTCTCGCATGCGTATGAACGGGGAGAGACTCAACCGTCCTTTAATACGGCCACTATCCTCAGAACCATCTCGAGAAGCTTACAATCCTGCTCCTCCACCGGCTTTAATCCCTCCTCCACGTCCAAAACAGACCGAGGAGCTTCCTCACGTGGCGATTCCACCACCACCTGCAAAACACATTGAGAGGGAGAAATTTTTTCAGGAAAACAAGGATGCTTCTAATCTATCTGGCCACTTGAGAGGTCTCTCTTTACATAGTCGTAACGGAAGCAGCTCTCGCAGTGGAAGCTTTGATTTTAGAGACTGA 1458 0.4342 MAAELVNAATSDKLSETDWARNIEICELVARDKRQARDVVKAIKKKLGSKHPNTQLYAVTLLEMLMNNTGEHIHEQVIDIGIIPIIVKIVKKKSDLPVRERIFLLLDATQSSLGGASGKFPQYYHAYYDLVNAGVQFPQSAQVVESNHASSQPSSTGSIPNREQAPPRHEAVVVPQAESKTVPESSIIQKAGNALEVLKEVLDAVDAQHPQGASDEFTLDLVEQCSFQKQRVMHLVMASRDERTVSRAIELNEQLQKVLARHDDLVSGRTTTTTANEPVPKVLPRHDDVVSGRVTTTSNEQFPKVLPRRGDLVSGRVTTNANEQLPKVLPKRDDVVSGRATATVATHFDLDESEEEEEPEQLVRRLRKGKACARPEDEQTEKDISRMRMNGERLNRPLIRPLSSEPSREAYNPAPPPALIPPPRPKQTEELPHVAIPPPPAKHIEREKFFQENKDASNLSGHLRGLSLHSRNGSSSRSGSFDFRD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02335 485 Gene3D - 178 276 IPR038425 -
Vivi3g02335 485 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Vivi3g02335 485 MobiDBLite consensus disorder prediction 359 390 - -
Vivi3g02335 485 Gene3D - 2 136 IPR008942 -
Vivi3g02335 485 SUPERFAMILY GAT-like domain 165 269 - -
Vivi3g02335 485 MobiDBLite consensus disorder prediction 144 162 - -
Vivi3g02335 485 CDD GAT_GGA-like_plant 187 265 - -
Vivi3g02335 485 PANTHER TOM1-LIKE PROTEIN 1 457 IPR044836 GO:0035091|GO:0043130|GO:0043328
Vivi3g02335 485 Pfam GAT domain 195 268 IPR004152 GO:0035091|GO:0043130
Vivi3g02335 485 ProSiteProfiles GAT domain profile. 179 267 IPR004152 GO:0035091|GO:0043130
Vivi3g02335 485 Pfam VHS domain 5 108 IPR002014 GO:0035091|GO:0043130
Vivi3g02335 485 MobiDBLite consensus disorder prediction 410 439 - -
Vivi3g02335 485 MobiDBLite consensus disorder prediction 144 170 - -
Vivi3g02335 485 CDD VHS 2 130 - -
Vivi3g02335 485 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Vivi3g02335 485 MobiDBLite consensus disorder prediction 350 485 - -
Vivi3g02335 485 MobiDBLite consensus disorder prediction 454 485 - -
Vivi3g02335 485 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02335 Vivi-Chr3 39325022 39329450 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02335 - - vvo:131661060 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02335 3 39325022 39329450 Vivi3g02335 3 39325022 39329450 ECH
Vivi5g04593 5 144252143 144257395 Vivi3g02335 3 39325022 39329450 PCT