Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02262 ATGGAAACTGTTAGCACTGAACCTGCAAAACCAGAACTAGATTCCAATCAAGATTTGTTGGCTAAAGATGAAGCAAAAGCTCAAGTTGTTGTTGTTCTTCAAGATGATGATGGAGGTTTGAAAGATAGCTCAGAAGAAGAGCTCAAGAAAGTCAGTCTCATGAGAACTTTTGTTGAAGCCCGCGACCCTTCTTCCAAGGAAGTAGATGATTTGATGATTAGAAGATTCTTGAGAGCTCGTGATTTAGATGTAGAGAAAGCTTCAGCTATGTTCCTTAAGTACTTGAAATGGAAGCATTCATTTGTTCCAACTGGTTCAGTTTCTGCTTCGGAGATCCGTGATGATCTTGCTCAGGAGAAGATGTATGTTCAAGGAGTGGATAAAAAGGGTCGACCTATAACTGTTGCTTTTGCTGCTAAGCATTTTCAAAACAAAAATGGTTTGGAAGCATTCAAACGATATGTAGTTTTTGCGCTTGAGAAACTATGTTCGAGGATTCCAGCAGGGGAAGAAAAGTTTCTTGCTATTGCAGATATTAAGGGATGGGGATATGTAAACAGTGACCTTCGTGGATATCTTGGTGCTCTAAACATTCTTCAGGATTATTATCCGGAAAGATTGGGAAAATTGTTCATAGTTCATGCTCCTTACATGTTTATGAAAGTATGGAAACTTGTTTACCCTTTCATTGATGACAATACCAAGAAGAAGATAGTATTTGTGGAGAACAAGAAGCTGAAATCGACATTGCTAGAAGAGATTGACGAGAGTCAGCTCCCAGAGATATATGGAGGGAAACTTCAACTAGTTCCAATACAGGATTCATGA 828 0.3889 METVSTEPAKPELDSNQDLLAKDEAKAQVVVVLQDDDGGLKDSSEEELKKVSLMRTFVEARDPSSKEVDDLMIRRFLRARDLDVEKASAMFLKYLKWKHSFVPTGSVSASEIRDDLAQEKMYVQGVDKKGRPITVAFAAKHFQNKNGLEAFKRYVVFALEKLCSRIPAGEEKFLAIADIKGWGYVNSDLRGYLGALNILQDYYPERLGKLFIVHAPYMFMKVWKLVYPFIDDNTKKKIVFVENKKLKSTLLEEIDESQLPEIYGGKLQLVPIQDS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02262 275 SUPERFAMILY CRAL/TRIO domain 111 268 IPR036865 -
Vivi3g02262 275 CDD SEC14 122 266 IPR001251 -
Vivi3g02262 275 Pfam CRAL/TRIO domain 119 265 IPR001251 -
Vivi3g02262 275 SMART sec14_4 115 268 IPR001251 -
Vivi3g02262 275 SMART CRAL_TRIO_N_2 69 94 IPR011074 -
Vivi3g02262 275 PANTHER OS03G0850700 PROTEIN 42 274 - -
Vivi3g02262 275 SUPERFAMILY CRAL/TRIO N-terminal domain 40 102 IPR036273 -
Vivi3g02262 275 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 109 271 IPR001251 -
Vivi3g02262 275 Gene3D - 2 274 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02262 Vivi-Chr3 37276801 37278919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02262 75 261 Acyl Lipid Metabolism Gene Families AT5G47730 26.601 2.14e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02262 - - gmx:100797666 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02262 3 37276801 37278919 Vivi3g02262 3 37276801 37278919 ECH
Vivi5g05724 5 160721325 160725670 Vivi3g02262 3 37276801 37278919 PCT