Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02191 ATGGGAGAGGAAGAAAAGAAAACAGAGGAAACCAAAACAGAGGAAGAAGAAACCAAGGCGGAGGAAAAACCGGAGGAAACTAAAGATGAAGCTGCTGCTCCTCCTCCGCCGCCGGAGGAGATTGTGCTTAAAGTGTTTATGCATTGTGAAGGCTGTGCTCGGAAAGTTCGTCGGTGTTTGAAGAATTTCCCAGGAGTTGAAGGTGTGACAACTAACTGCAAAACTCACGAGGTTGTTGTGAAAGGTGAGAAAGCGGATCCAGTGAAGGTTATGGAGAGAATTCAGATGAAGAGTCGAAGGAAGGTTGAGCTTGTATCTCCAATCCCGAATCCTCCTGTGGAAGAAAAAGTTGTTGAGGAAGAAGTGAAACCAGCACCACCTGAAGAGGAGAAGAAAGAAGAGCCTCAGATTGTAACTGTTCTTAAAGTTCACATGCATTGTGAAGCTTGTGCTGAAGAAATCAAAAAACGCATACTCAAAATGAAGGGAGTGGAATCGGTTGAAACTGATTTGGAGAAATCGGAGGTAACCGTGAAGGGAGTGTATGATCCAGCAATGTTGGTTCAATACGTGCACAAGCGATTTGGGAAGCAAGCTATGATTGTGAATGAAGAGAAAGTGGAGGAAGAAGCGAAAGCCGAGGAAGAAAAAGTGGAGGAAGAATCGAAAGCCGAGGAAGAGAAAAAAGAGGAGAAGAGTGAACAAGTGGAGGAGGAGAAGAAAGAAGGAGAGAGTGAGGCCAAAACACTAGAAGGAGCAATTGTTGTACAAGAGACAAAACTGGAAGAGGAGATTAAGAAAAATGAACACTACTATAATCCACCGATGGATTTGTATGCACAACCACCATTAGGTTATCATGCATATCCACCAATAGCTTATCCTGCATATCCACCATACTATCAAGCATACATTCCACCAGCACCTCAGATCTTCAGCGATGAGAATCCAAATGCTTGCAGTGTTATGTAA 972 0.4362 MGEEEKKTEETKTEEEETKAEEKPEETKDEAAAPPPPPEEIVLKVFMHCEGCARKVRRCLKNFPGVEGVTTNCKTHEVVVKGEKADPVKVMERIQMKSRRKVELVSPIPNPPVEEKVVEEEVKPAPPEEEKKEEPQIVTVLKVHMHCEACAEEIKKRILKMKGVESVETDLEKSEVTVKGVYDPAMLVQYVHKRFGKQAMIVNEEKVEEEAKAEEEKVEEESKAEEEKKEEKSEQVEEEKKEGESEAKTLEGAIVVQETKLEEEIKKNEHYYNPPMDLYAQPPLGYHAYPPIAYPAYPPYYQAYIPPAPQIFSDENPNACSVM 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02191 323 CDD HMA 47 103 IPR006121 GO:0046872
Vivi3g02191 323 Gene3D - 38 110 - -
Vivi3g02191 323 Coils Coil 197 253 - -
Vivi3g02191 323 ProSiteProfiles Heavy-metal-associated domain profile. 38 102 IPR006121 GO:0046872
Vivi3g02191 323 MobiDBLite consensus disorder prediction 1 39 - -
Vivi3g02191 323 SUPERFAMILY HMA, heavy metal-associated domain 137 199 IPR036163 GO:0046872
Vivi3g02191 323 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 7 21 323 IPR044577 GO:0046872
Vivi3g02191 323 MobiDBLite consensus disorder prediction 209 248 - -
Vivi3g02191 323 Gene3D - 134 201 - -
Vivi3g02191 323 ProSiteProfiles Heavy-metal-associated domain profile. 136 200 IPR006121 GO:0046872
Vivi3g02191 323 Pfam Heavy-metal-associated domain 43 94 IPR006121 GO:0046872
Vivi3g02191 323 Pfam Heavy-metal-associated domain 141 191 IPR006121 GO:0046872
Vivi3g02191 323 SUPERFAMILY HMA, heavy metal-associated domain 39 95 IPR036163 GO:0046872
Vivi3g02191 323 MobiDBLite consensus disorder prediction 1 33 - -
Vivi3g02191 323 CDD HMA 140 199 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02191 Vivi-Chr3 36120764 36122514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02191 - - mtr:11419966 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02191 3 36120764 36122514 Vivi3g02191 3 36120764 36122514 ECH
Vivi5g05781 5 161641745 161643618 Vivi3g02191 3 36120764 36122514 PCT