Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01956 ATGGATGTTGGTGATGATGGATGGAACATCACAGAGCATAAGTGGAGTTTGATGATGATGCAAAGATTTAATCATGAGTTACGGGAACAACCAGTACTAGATATAAAATCTACAAAGAAATTTCCATTAACATTGAGGTTGATAGTTTTAGCTATCGCAGTGGTTTGTGGAATATATATTTGCTCAATTTGCTTAGAGCTAAAAGGTATACGCACAACTTCCCAGTTATTAGGTATTAGTGTCTTCAAGCAACCATGTCCTCTTCCTTCCAACGTCCAAGATTGGGAACTTCCATATTTGCATTATCCACAACCCAAAACCTATAGCAGAGAGGAGTGTAGTTGCAATCCGGTTCGATATTTTTGCATTATATCAATGCAAAGATCTGGGAGTGGATGGTTCGAGACGTTTTTGAACAGTCATATTAACATAAGCTCCAATGGAGAAATATTTTCAGTTAGCAAAAGAAGAGAAAATGTTTCTTTAATTTTGAAGACGATAGATGAAGTGTATAATCTTGATTGGTTTACCAGTGCCTCCAAGAATGAGTGTTCTGCTGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTTTGATGGAGCATCATAAAGAAATAGTGGAATATTTGGAGCAGAAACAAGTTTCTACAATATTCTTGTTTAGAAGAAATTTGCTACGTAGAATGGTTTCTGTGTTGGCCAATACATATGATAAAGATTTCAAGCTACTAAATGGAACACACCAGTCTCACGTGCATTCTACAATGGAGGCTTCGATACTTGCGAAGTACAAACCACAAATCAATTGCACGTTATTGATTCCAGAGCTTAAGCAAACCGAGGAGACGATCAGAAAAGCGATTGCATATTTTAAGAACATTCGTCACGTTGTTCTTTACTACGAGGATCTTGTCAACAATCGCAATAAATTGAAGGATGTTCAAGAATTTCTTAAGGTGCCATGCAGAGAACTAGAGAGTCGTCAAGTGAAGATACATACTGCACCATTATCGTTGCAAATTGAAAACTGGGATGAAGTTCAGAAAAAGCTGAAAGGGACCAAGTACGGGAGTTTTCTTTATAAAGACTAA 1089 0.3737 MDVGDDGWNITEHKWSLMMMQRFNHELREQPVLDIKSTKKFPLTLRLIVLAIAVVCGIYICSICLELKGIRTTSQLLGISVFKQPCPLPSNVQDWELPYLHYPQPKTYSREECSCNPVRYFCIISMQRSGSGWFETFLNSHINISSNGEIFSVSKRRENVSLILKTIDEVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYLEQKQVSTIFLFRRNLLRRMVSVLANTYDKDFKLLNGTHQSHVHSTMEASILAKYKPQINCTLLIPELKQTEETIRKAIAYFKNIRHVVLYYEDLVNNRNKLKDVQEFLKVPCRELESRQVKIHTAPLSLQIENWDEVQKKLKGTKYGSFLYKD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01956 362 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 28 360 - -
Vivi3g01956 362 Gene3D - 118 349 IPR027417 -
Vivi3g01956 362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 358 IPR027417 -
Vivi3g01956 362 Pfam Sulfotransferase domain 122 323 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01956 Vivi-Chr3 32326441 32331695 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01956 - - gmx:100808615 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01956 3 32326441 32331695 Vivi2g03243 2 134247122 134251109 ECH
Vivi3g01956 3 32326441 32331695 Vivi1g02897 1 63150290 63153366 ECH
Vivi3g01956 3 32326441 32331695 Vivi3g01956 3 32326441 32331695 ECH