Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g02897 ATGTTTCTTTCCAGTACAACTTTTCTGTTCAAGTGGCATGAACAAAGAACTCAAAAACACTGCTTTTTTTTCAAGGTCTTCAACAAAAAAAACACCTTCCTCCAAACACAAACAAGATCCAAACTCCAAACCTTAATCTTTGCCTCTTGTTCACTTTCTTCCTCTCTCAAACATTCACTTCTCTTAGTTCCACTCCCTTTGTCTTTTTCTTGTCTAGATAAAAAAACAACAATGGTAGTACAAGACATGTTTTACTTCAACAAGGACATTCTTGTTATAAAGGCTCAGAAGAAATCACCATTGTTGTTAAGGATGTCTTTGTTGATGTTTTCGATGGTGTGTGGTGTTTTTGTGTTCTATGTTTGTTTGAAACAAACTAGCATTCATGCTAGAACTATACTTCTTGAGTTGCAACAAAATGAGAAGCCTAATAGGAATATGTTCAACCTATTAGACTTTTCTTATCTACATTATCCTAATCCCGTGTCTTTTAACAGGAGTGAGTGTGCTCGAAATCCGATTCGATTGTTTGCTATATTGACGAATCAAAGATCGGGAAGTGGTTGGTTTGAGACCCTTTTAAATAGTCATATGAATGTAAGCTCGAACGGGGAGATATTTTCGGTTCCTGAAAGACGAGTAAATGTATCGACAATAGTGAAGACTTTGGATAAAATTTACAATTTGGATTGGCTCAATAGTGCTTCCAAGAATGAGTGTTCTGCTGCTATTGGCTTGAAGTGGATGCTTAATCAGGGATTATTGGAGCACCCTAAGGAAATCGCAGATTACTTCAACTGTAGAGGCGTTTCTGTCATTTTTCTTTTCCGGAGAAACTTGTTACGCCGAGTGGTATCGACGCTTGCCAATTCCTATGACCGATATGCTAAGCTATTGAATGGCACTCATAAGTCCCATGTTCATTCTAAAGAAGAGGCTGATACGCTTTCAAAGTACAAGCCTACCATAAATTCGACGTCGTTGCTAGCTGATCTGAATGATATGGAGAGAAAAACTGCAAAGGCATTAGAATACTTCAACACCACACGGCATATGATTTTGTACTATGAGGATCTTATCAGAAATCGAACTAAGCTAAAAGAGGTGCAAGAGTTTCTAGGATTGCCGGTAATGGAATTATCGAGCCGTCAAGTAAAGATACATAAAGGACCATTATCAGAACACATTAAAAACTGGGATGAAGTTGCCAACAAGCTCAAAGGAACTTCTTATGAGAGTTTTCTACAAGCCGACTATTCATCATAA 1266 0.3768 MFLSSTTFLFKWHEQRTQKHCFFFKVFNKKNTFLQTQTRSKLQTLIFASCSLSSSLKHSLLLVPLPLSFSCLDKKTTMVVQDMFYFNKDILVIKAQKKSPLLLRMSLLMFSMVCGVFVFYVCLKQTSIHARTILLELQQNEKPNRNMFNLLDFSYLHYPNPVSFNRSECARNPIRLFAILTNQRSGSGWFETLLNSHMNVSSNGEIFSVPERRVNVSTIVKTLDKIYNLDWLNSASKNECSAAIGLKWMLNQGLLEHPKEIADYFNCRGVSVIFLFRRNLLRRVVSTLANSYDRYAKLLNGTHKSHVHSKEEADTLSKYKPTINSTSLLADLNDMERKTAKALEYFNTTRHMILYYEDLIRNRTKLKEVQEFLGLPVMELSSRQVKIHKGPLSEHIKNWDEVANKLKGTSYESFLQADYSS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g02897 421 Gene3D - 175 406 IPR027417 -
Vivi1g02897 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 417 IPR027417 -
Vivi1g02897 421 Pfam Sulfotransferase domain 179 384 IPR000863 GO:0008146
Vivi1g02897 421 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 78 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g02897 Vivi-Chr1 63150290 63153366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g02897 - - gmx:100795357 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03243 2 134247122 134251109 Vivi1g02897 1 63150290 63153366 ECH
Vivi3g01956 3 32326441 32331695 Vivi1g02897 1 63150290 63153366 ECH
Vivi1g02897 1 63150290 63153366 Vivi1g02897 1 63150290 63153366 ECH
Vivi1g02897 1 63150290 63153366 Vivi2g03243 2 134247122 134251109 PCT