Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01838 ATGAAGCCTGTGTTTGCAATATTCCTTGTGTGCCTTGTCCTCACTTCCTCTTTATTGGAAGTTTCATTAGCTGGTTCTGATTTTTGTGACACAAGGTGTGGAGAAAGGTGCTCGAAAGCTTCGGTGCAGGATAGATGCTTGAAGTATTGTGGGATCTGTTGTGAGAAATGTAACTGTGTGCCATCTGGAACTTATGGTAACAAAGATGAGTGTCCTTGTTATAGAGACATGAAGAACTCAAAGGGACAAGGAAAATGTCCTTAA 264 0.4129 MKPVFAIFLVCLVLTSSLLEVSLAGSDFCDTRCGERCSKASVQDRCLKYCGICCEKCNCVPSGTYGNKDECPCYRDMKNSKGQGKCP 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01838 87 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 6 87 - -
Vivi3g01838 87 Pfam Gibberellin regulated protein 28 87 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01838 Vivi-Chr3 29732743 29733679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01838 - - cam:101505787 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01838 3 29732743 29733679 Vivi1g03906 1 82525726 82526436 ECH
Vivi3g01838 3 29732743 29733679 Vivi3g01838 3 29732743 29733679 ECH
Vivi4g05562 4 190934367 190935187 Vivi3g01838 3 29732743 29733679 PCT