Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01496 ATGGTTCCTTGTTTGATTTCATTCTACGCCAAACTGAGGACATTCAAGCCAAGGAAGATACATGAACCCCGAAGAAAATCCATATCAAGAAAATTTGTCACCTTCGATTATACCACATTACAATTTCTCAAAGCAGCTTCAATTAACATAAACAAGAACATTAGAAAAATATATTTCAACGATATACTCCCACTTTTTATTGCTTCTGGAGATGATGGCAATTATGCACAAACTGCGGCCAACGATCTTACAGTATTGCAGGCCATCTCTAAAAGGATTCATTATGGAAAGTTTGTAGCTGAGACAAAGTTTAGAAAATCTCCTCGTGACTATAAGCCTTTAATTCGTGTCAAGGACAGAGAAGCATTGATGAAATTGTTGGTAGATAAGAGAGTAGAAAAGATGGTTCTAAAGAGAGTTGAAAAGAAGGCAATGGTGTTTGGTCAAGAAGTGAGCCTTGATCCTAATGTCAAAGGAAAATACAAGGTTGATCCATCAATAGTTTATAGTTTGTATAAAAAATGGATAATACCCATGACAAAAGATGTTGAAGTCGAGTATTTGTTACGTCGTCTCGATTGA 582 0.3574 MVPCLISFYAKLRTFKPRKIHEPRRKSISRKFVTFDYTTLQFLKAASININKNIRKIYFNDILPLFIASGDDGNYAQTAANDLTVLQAISKRIHYGKFVAETKFRKSPRDYKPLIRVKDREALMKLLVDKRVEKMVLKRVEKKAMVFGQEVSLDPNVKGKYKVDPSIVYSLYKKWIIPMTKDVEVEYLLRRLD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01496 193 PANTHER CHORISMATE MUTASE 36 193 IPR008238 GO:0004106|GO:0009073
Vivi3g01496 193 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 9 193 IPR037039 GO:0004106|GO:0009073
Vivi3g01496 193 SUPERFAMILY Chorismate mutase II 34 193 IPR036263 GO:0046417
Vivi3g01496 193 ProSiteProfiles Chorismate mutase domain profile. 1 193 IPR008238 GO:0004106|GO:0009073
Vivi3g01496 193 NCBIfam chorismate mutase 9 193 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01496 Vivi-Chr3 24677254 24688186 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01496 K01850 - gmx:100779968 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01496 3 24677254 24688186 Vivi3g01496 3 24677254 24688186 ECH
Vivi3g01496 3 24677254 24688186 Vivi3g01457 3 24018044 24027792 PCT