Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01457 ATGTTTCGGTTTCTAGTTGTTGTGGCTGTAATAACAATGTTGGTGAGTTGTACGGTTACACACAGAATGGAAAAATCAGGTGAATACACACTTGAATCAGTGAGAGAGTCTTTGATTCGACAAGAAGATACGATAATATTTAGTTTGATTGAGAGAGCAAGGTTTCCTCTCAATTCTCCCACCTATCAACGAAACTACTCTTCCGTTCTCAACTTTTCTGGTTCTTTGTTTGATTTCATTCTACACCAAACTGAGGACATTCAAGCCAAGACAGGAAGGTACATGAACCCCAAAGAAAACCCTTATGAAGAAAAATTGTCACCTTCAATTATACCACATTACAATTTCTCACAGTTTTTGCATCCTGCAGCAGCTTCAATTAACATAAACAAGAACATAAGGAAAGTATATTTCAACAATATTCTCCCAGTTTTTATTGCTTCTGGAGATGATGGCAATTATGCACAAACTGCAACCAATGATCTTACAATATTGCAGGCCATCTCCAAAAGGATTCATTATGGAAAATTTGTAGCTGAGACAAAGTTCAGAAAATCTCCTCATGACTATGAGCCTTTAATTCGTGCCAAGGACAGAGAAACATTGATGAGTTTGTTGGTAGATAAGAGAGTAGAAAAGATGGTTCTAAAGAGAGTTGAAAAGAAGGCAATGGTGTTTGGTCAAGAAGTGAGCCTTGATCCTAATGTCAAAGGAAAATACAAGGTTGATCCATCAATTGTTTATAGTTTGTATAAAAAATGGATAATACCCATGACAAAAGATGTTGAAGTCGAGTATTTGTTACGTCGTCTAGATTGA 819 0.3626 MFRFLVVVAVITMLVSCTVTHRMEKSGEYTLESVRESLIRQEDTIIFSLIERARFPLNSPTYQRNYSSVLNFSGSLFDFILHQTEDIQAKTGRYMNPKENPYEEKLSPSIIPHYNFSQFLHPAAASININKNIRKVYFNNILPVFIASGDDGNYAQTATNDLTILQAISKRIHYGKFVAETKFRKSPHDYEPLIRAKDRETLMSLLVDKRVEKMVLKRVEKKAMVFGQEVSLDPNVKGKYKVDPSIVYSLYKKWIIPMTKDVEVEYLLRRLD 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01457 272 FunFam Chorismate mutase 22 272 - -
Vivi3g01457 272 SUPERFAMILY Chorismate mutase II 22 272 IPR036263 GO:0046417
Vivi3g01457 272 NCBIfam chorismate mutase 30 272 IPR008238 GO:0004106|GO:0009073
Vivi3g01457 272 ProSiteProfiles Chorismate mutase domain profile. 22 272 IPR008238 GO:0004106|GO:0009073
Vivi3g01457 272 PANTHER CHORISMATE MUTASE 17 272 IPR008238 GO:0004106|GO:0009073
Vivi3g01457 272 PIRSF Chor_mut_AroQ_eu 17 272 IPR008238 GO:0004106|GO:0009073
Vivi3g01457 272 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Vivi3g01457 272 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 22 272 IPR037039 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01457 Vivi-Chr3 24018044 24027792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01457 K01850 - gmx:100791095 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01457 3 24018044 24027792 Vivi3g01457 3 24018044 24027792 ECH
Vivi3g01496 3 24677254 24688186 Vivi3g01457 3 24018044 24027792 PCT