Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01439 ATGTTGTTTAAATTTGTAGCAGGTCCAAGGAAGAAAAAACCAGGAACCGTTCCTGTCTACCTAAACGTCTATGACCTCACACCTATCAACGGTTATGCTTATTGGTTTGGCCTTGGAATCTATCATTCAGGTGTTCAAGTTCATGATGTTGAATATGGTTTTGGGGCACATGAAAATGACAGTACTGGTATATTTGAAGTGCAACCGAAAAACTGTCCTGGTTTCACTTTCAGAAAATCTATTTTCATTGGGACAACGGATCTGGGGAGTAAAGATGTTGGTGTTTTTATGGAGAAACTGGCGAGAGAATATTCTGGGAATTGTTATCATCTTATTTCTAAGAATTGTAACCATTTTTGTGATGATGTTTGTTATAAGTTGACGGGGAAATCGATTCCGAGATGGGTTAATCGACTTGCCAGACTTGGTTTATTTTGCAACTGTGTTCTTCCGCCCGGCTTAAACGAAACAAAGGTTCGACAAGTTACATCCGACAAGGCTCAAGAAGGTGAAAAGAGAAAAATCAGAAGTCAATCCAACAGATACGAGGCTTCCTCCAACCCTCGCGGTTCATCGAGACATTGCCTTCGTCCATCGTCTTTGATGAAAGCTTCTTCAACCACGACATTAACAGTAAAGTAA 642 0.4034 MLFKFVAGPRKKKPGTVPVYLNVYDLTPINGYAYWFGLGIYHSGVQVHDVEYGFGAHENDSTGIFEVQPKNCPGFTFRKSIFIGTTDLGSKDVGVFMEKLAREYSGNCYHLISKNCNHFCDDVCYKLTGKSIPRWVNRLARLGLFCNCVLPPGLNETKVRQVTSDKAQEGEKRKIRSQSNRYEASSNPRGSSRHCLRPSSLMKASSTTTLTVK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01439 213 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Vivi3g01439 213 Gene3D PPPDE domains 12 174 IPR042266 -
Vivi3g01439 213 PANTHER DESUMOYLATING ISOPEPTIDASE 16 188 IPR008580 GO:0008233
Vivi3g01439 213 MobiDBLite consensus disorder prediction 162 179 - -
Vivi3g01439 213 MobiDBLite consensus disorder prediction 180 213 - -
Vivi3g01439 213 MobiDBLite consensus disorder prediction 161 213 - -
Vivi3g01439 213 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Vivi3g01439 213 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01439 Vivi-Chr3 23486933 23489066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01439 K22763 - gmx:100306675 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05141 4 182709658 182712554 Vivi3g01439 3 23486933 23489066 PCT