Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01271 ATGGATACTGAGAGTGGAGTCCCAATTTTAGATTTTCGTAAGAGCACTGGAATTACATTAGAAGAAGGAGGTCAAGGATGGAAAGAAATGATTAAGAAAGTGAGAGAAGCATTTGAGAGTCATAGTATGTTTCTCTTAAGATGTGATGAAATACCGAAAGAATTACAAAATGAAATGTTCGCAAACATTAAATCTTTGTTTGATCTACCTGAGGAGACAAAGACGAAGTTCACTGGAAAAAGAGTTTATAGGGGCTATACGTCCAAGAGCGTTGCCCTTCCTAATAGTCAAACATTCGGTATTGATGATACTTTTGATCCAAATGAGACTCGAAGTTTCACTAAGCTCATGTGGCCTGAAGGAAATCCAAATTTCCGTGAGGCACTACTTTCATTTAGCTCAGAAGCACGAAAAATAAGCTCATTTATCCTAAAGATGGTTGTGGAGGGCTTTGGCCTTCCAGAAAATTACATTTCAGAAGTTGAAGAGTTGTGTAGAGGTAATGATACACGGCTAACAAAATATCCACTCCCTAAAGAAACAACTGATTCTGCTATTACTTTTGTGCCTCACACTGACAAATTCAATCTTACCTTCATAAGTGAGAACGAAGTCCAAGGTCTACAACTTCTACAGAAATCAGGCAATTGGGTTAACGTAAATGTTCCTTCAAATGGTTTTGTTGTAATGGTTGGTGAAATGTTGCAGGTATGGAGTAATGGAAGATTTAAAGCACCAATACATAGAGTGGCGATAAGAGGAAACAAAGACAGATATGTATTTATTCTTTTTTCACTTCTAAAGGAAGAAACATTCATTAAGGTACCCCCTGAGTTAGTAGATGAGGATCATCCTCTCCGTTACAAGACATTCATGTATGAAGATTTCATCAATTTTATTAAAACTGTTGGTACTAAATTGGGAGCATTTGAAGATTTTGCTGGAATTTAA 951 0.3659 MDTESGVPILDFRKSTGITLEEGGQGWKEMIKKVREAFESHSMFLLRCDEIPKELQNEMFANIKSLFDLPEETKTKFTGKRVYRGYTSKSVALPNSQTFGIDDTFDPNETRSFTKLMWPEGNPNFREALLSFSSEARKISSFILKMVVEGFGLPENYISEVEELCRGNDTRLTKYPLPKETTDSAITFVPHTDKFNLTFISENEVQGLQLLQKSGNWVNVNVPSNGFVVMVGEMLQVWSNGRFKAPIHRVAIRGNKDRYVFILFSLLKEETFIKVPPELVDEDHPLRYKTFMYEDFINFIKTVGTKLGAFEDFAGI 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01271 316 SUPERFAMILY Clavaminate synthase-like 5 300 - -
Vivi3g01271 316 FunFam 2-oxoglutarate-dependent dioxygenase DAO 5 313 - -
Vivi3g01271 316 Gene3D - 1 302 IPR027443 -
Vivi3g01271 316 Pfam 2OG-Fe(II) oxygenase superfamily 173 264 IPR044861 -
Vivi3g01271 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 7 296 - -
Vivi3g01271 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 92 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01271 Vivi-Chr3 21133609 21134751 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01271 119 289 Glycosyltransferase AT5G59530 26.286 3.29e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01271 - - vvo:131656517 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01271 3 21133609 21134751 Vivi3g01271 3 21133609 21134751 ECH
Vivi3g01271 3 21133609 21134751 Vivi3g01274 3 21165893 21167109 PCT