Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00362 ATGCGCAATATTGATGACAGGAACCGCCTTCTGCTTTCTATCTTGAATATCTGCAAAGATGTCCTGGGCCGCCTTCCTAAAGTTGTTGGTATCGATGTTGTTGAGATGGCTCTTTGGGCTAAGGAAAATACACCTGCAGTTCCCACTCAAAGTAACCAAGCAGGTGGCGCTACTGTTGAATATGCTGTCAATGAAGCAGAATTGAAAGTCAATGTTGAGAAGGAGCTTGTCTCCCAAGCAGAGGAAGAGGACATGGAAGCTCTTTTGGGAAATTATATCACGGGTATTAGTCAAGCAGAGGCTTTTTCTGAAAGGTTGAAAAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCTATTTTAGAAAGTGAACCTTTGATAGATGAGGTGTTGCAAGGGCTTGAATCTGCTTCAAATTGCGTGGAAGACATGGATGAATGGTTAGGCATGTTCAATGTGAAACTCAGACACATGAGAGAGGATATTGAATCAATTGAAATCCGCAATAACAAGTTGGAAATGCAATCAGTAAATAACCAATCTCTCATTGTTGAGCTTGATAAACTTGTTGAGCAATTGCATATCCCTTCAGAGTATTCAGCATTTTTGACTGGAGATTCATTTGATGAAGCGCAAATGCTTCAAAATATTGAAGCATCTGAGTGGTTGACTGGGGCCTTGCGTGCTTTTGAAGTGTCAAACATAGATCCTACTTACGCAAAGATGAGAGCTTTTAAAGAGAAACGAGGTGAACTTCAAATAATAAAATCTACTTTTGTTAGAAGAGCCTCCGAGTTTTTGAGGAGTTACTTTGCTACTTTTGTTGATTTCATGATGAGTGATAAGAAATACTTTTCTCAGCGGGGACAGTTGAAAAGGCCAGATCATGCTGACCTGCGATACAAGTGCAGGACATATGCACGCCTTTTGCAACATTTGAAGATTCTTGATAAGAATTGCCTGGGCCCATTGAAAAAAGCTTATTGCTGCTCTCTAAACTTGCTTCTTCGCAGGGAGGCCCGTGAGTATGCTAATGAACTTCGTGCTAGTAATAAAACTGCTAAAAGTCTAACCGAAGGTTCCACGGGTTCTGGTCAGAATGCAAATTCTGCTGACTCTTCTACAGTTGCTGATGCATATGCAAAGCTGCTCACTGTTTTTATCCCACTAATGGTGGATGAGAGTTCTTTTTTTGCACACTTCATGTGCTTCGAAATTCCTACACCAGGACCCAATGATAATGCTAAAGATGACGATGATTTAGGAATTTCGGACATTGATGATAATGATAGTAAATCCAGTACAGGTATAAATTCTGTGGAGCTTGCAGCTTTAAATGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCTATGCTGTTGTGGAGTGGGCGTGCAAGATTGATCCTTTATGCTGCATATCAATGCACGGAATAACAGAACGCTATCTCTCTAGTCAAAAAGCTGATGCAGCAAGATTTGTCCGCCTTATGCTTGGTGACCTTGAGTCTCGGATATCTACAATGTTTACTCGTTTTGTTGATGACGCTTGCCATCAGATTGAAAGAAGTGAACGCAATGTTCGACAAAGTGTCCTACCCTACATTCCCAGATTTGCAACCCTTGCAACACGGATGGAGCAGTACATTGCTGGACAGTCCAGGGATTTGGTTGACCAAGCGTACACCAAATTTGTTAGCATAATGTTTGTAACTTTGGAAAAACTTGCACAAACAGAGCCAAAGTATGCAGATATATTTCTTATAGAGAACTATGCTGCTTTTCAGAATAGTTTGTATGACCTAGCCAATGTGGTGCCTACTTTGGCCAAGTTTTATCATCAAGCTAGTGAAGCGTATGAGCAATCATGCTCGCGCCATATTAGCATGATTATCTATTATCAATTTGAACGCCTTTTCCAGTATGCTCGAAGGATTGAGGACTTGATTTTCAATAATGTTTCACCTGAAGAGATTCCTTTCCAGCTTGGGCTGTCAAAAGTGGATTTTCGGAAGATGCTAAAAGCCAGTTTGTCTGGGATGGACAGATCCATTGGTGCAATGTATAAGAAATTGCAGAAGAATTTGACTTCAGAGGAACTGTTACCTTCCTTGTGGGATAAATGCAAGAAGGATTTTATTGATAAGTATGACAGTTTTGTCCAACTTGTGGCCAAGATTTACCCTGCTGAGTCAGTACCTTCTACACAAGAATTGAAAGATCTTTTAGCTAACATGTAA 2250 0.4071 MRNIDDRNRLLLSILNICKDVLGRLPKVVGIDVVEMALWAKENTPAVPTQSNQAGGATVEYAVNEAELKVNVEKELVSQAEEEDMEALLGNYITGISQAEAFSERLKRELQALEAANVHAILESEPLIDEVLQGLESASNCVEDMDEWLGMFNVKLRHMREDIESIEIRNNKLEMQSVNNQSLIVELDKLVEQLHIPSEYSAFLTGDSFDEAQMLQNIEASEWLTGALRAFEVSNIDPTYAKMRAFKEKRGELQIIKSTFVRRASEFLRSYFATFVDFMMSDKKYFSQRGQLKRPDHADLRYKCRTYARLLQHLKILDKNCLGPLKKAYCCSLNLLLRREAREYANELRASNKTAKSLTEGSTGSGQNANSADSSTVADAYAKLLTVFIPLMVDESSFFAHFMCFEIPTPGPNDNAKDDDDLGISDIDDNDSKSSTGINSVELAALNESLQDLLDGIQEDFYAVVEWACKIDPLCCISMHGITERYLSSQKADAARFVRLMLGDLESRISTMFTRFVDDACHQIERSERNVRQSVLPYIPRFATLATRMEQYIAGQSRDLVDQAYTKFVSIMFVTLEKLAQTEPKYADIFLIENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQSCSRHISMIIYYQFERLFQYARRIEDLIFNNVSPEEIPFQLGLSKVDFRKMLKASLSGMDRSIGAMYKKLQKNLTSEELLPSLWDKCKKDFIDKYDSFVQLVAKIYPAESVPSTQELKDLLANM 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00362 749 PANTHER SEC3/SYNTAXIN-RELATED 1 741 - -
Vivi3g00362 749 Coils Coil 156 176 - -
Vivi3g00362 749 MobiDBLite consensus disorder prediction 414 435 - -
Vivi3g00362 749 Coils Coil 96 123 - -
Vivi3g00362 749 Pfam Exocyst complex component Sec3 365 732 IPR019160 GO:0000145|GO:0006887
Vivi3g00362 749 Pfam Exocyst complex component Sec3 99 364 IPR019160 GO:0000145|GO:0006887
Vivi3g00362 749 Coils Coil 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00362 Vivi-Chr3 6357912 6387226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00362 1 749 EF-hand Containing Proteins AT1G47550 76.793 0.0 1216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00362 K19983 - gmx:100800803 1217.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00362 3 6357912 6387226 Vivi3g00362 3 6357912 6387226 ECH
Vivi4g05713 4 193515932 193537611 Vivi3g00362 3 6357912 6387226 PCT