Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07990 ATGAAACTTCTCAGAACAATCTTCATCCAGCATATCCACAAACGCCACCGTTTCCTCAACCCCAAATGCCTATTTTCATCTCCATTTTCAAACTCTTCTTTAACACCACCACCACCAGAGGAGACAGAAACCCTACATTCCAATAGTAGAAACCAATCCACCAACAGTTGGAGCATATACGGCAATGTAGTCGCGAAGCAGAGAATCAGCGATCACAGCGATGAAGATGAAGAAACCGAGGATGAAAAACCAAGTGAGAGTGGAAATGGGACCATGATGAATTTGAAGAATAGAAGCATAGTTAGGACGAGGACGACGGCGGCGAAGAGAGGTACTGGGAAGGTGAAAACTCAGTGGGTTTGTTATGATTGTGGGTATACTGCAGGACAATGGTGGGGGACTTGTCCTTCTTGTAGCATGGTTGGGACAATGAAGGAGTTTCATGAAGCGAAAGTTAGTGATGCTGTTGATAGTAGTAAGCTTAGAAGTGGTTTATCGGTTTCTGAAGATGCTATGAGAACTTGGCTACCGCAGAGGGCTGATCAGTTGCAACCGGTTAAATTGAGTGAAGTTAACAGTGGATTCAATGAGAAGGGTTGGCGATTTCCTTTGTCTGGCCCTTTTGGAGATGAAGTTTCTATTGTGCTCGGTGGTGGTCTTGTACCAGGCTCTTTGAATTTAGTTAGTGGTGATCCCGGTGTTGGGAAGAGTACACTGTTGTTGCAGATGGCAGCATTGATAGCAGGAGGCAATGGCAGTGACGGCGAGGCCTGTCCAGTTGTATATGTCTCTGGTGAAGAGAGTCTTCAGCAAATTGGTCATAGAGCAAATCGCCTTGGAATTAAATCTGATATTTATTTGTATTCAAGTACTGATATTGAGGACATATTAAGGATAGCTCAGTCTCTCCCCATTCGAGCTCTAGTTGTTGATTCAATACAAACTGTTTATTTGAAAGGAATAGTAGGAAGTGCTGGAGGGATTATGCAGGTGAAAGAATGTACTTCAGCTTTGATGCGATTTGCTAAAACGACTAACATCCCAGTACTTTTGATTGGGCATGTAACGAAATCTGGAGAGATAGCCGGGCCTCGTGTTCTGGAGCATATTGTTGATGTTGTCTTGTACTTGGAAGGTGAGAGGTTCACTTCATATCGAATGCTCCGCGCTGTGAAAAACCGGTTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGTCAGAATCAGGATTTCAGGCTGTTTCCAATGCCACTGAAATGTTTCTCACTGAACAAGACCCTGATTCAGATGTTTTAGTTGGGTTAGCTTTTACCGTAATCATGGATGGTTCAAGAACTTTCATAATTGAAGTTCAGGCACTCTGCCTTTCTCAGTCCCCGGTGGCAGGGTCAACTTCAAAAGTGGTTAATGGAGTTGACTCAAATAGAGCTAACATGATCAAATGTGTTCTTATAAAGCAAGCAGGTCTTCATATCCCTGTAAGTTCTGTGCATTTGAATGTTGTTAGTGGATTGACATTGACTGAGACTGCTGGAGATCTTGCAATAGCAGCTGCAATTTGCAGCAGTTTCTTGGAGTACCCTATTCCAAAGGGCATTGCATTCATTGGTGAAATTGGTCTTAGCGGAGAGCTTCGCACGGTTCCTAGAATCGACAAAAGAGTACACGCATTGGCAAAGTTGGGTTACAAAACCTGTGTAGTACCAAAGCAAGCAGTAAAAGCTTTAGGAACTGAAGGTCTAGAAAATATTAAAATAGTAGGTTGCAAGAATCTGAAGGAGTTTATCAATGTCGTATTCAGCAGATAA 1809 0.4295 MKLLRTIFIQHIHKRHRFLNPKCLFSSPFSNSSLTPPPPEETETLHSNSRNQSTNSWSIYGNVVAKQRISDHSDEDEETEDEKPSESGNGTMMNLKNRSIVRTRTTAAKRGTGKVKTQWVCYDCGYTAGQWWGTCPSCSMVGTMKEFHEAKVSDAVDSSKLRSGLSVSEDAMRTWLPQRADQLQPVKLSEVNSGFNEKGWRFPLSGPFGDEVSIVLGGGLVPGSLNLVSGDPGVGKSTLLLQMAALIAGGNGSDGEACPVVYVSGEESLQQIGHRANRLGIKSDIYLYSSTDIEDILRIAQSLPIRALVVDSIQTVYLKGIVGSAGGIMQVKECTSALMRFAKTTNIPVLLIGHVTKSGEIAGPRVLEHIVDVVLYLEGERFTSYRMLRAVKNRFGSTDELGVFEMSESGFQAVSNATEMFLTEQDPDSDVLVGLAFTVIMDGSRTFIIEVQALCLSQSPVAGSTSKVVNGVDSNRANMIKCVLIKQAGLHIPVSSVHLNVVSGLTLTETAGDLAIAAAICSSFLEYPIPKGIAFIGEIGLSGELRTVPRIDKRVHALAKLGYKTCVVPKQAVKALGTEGLENIKIVGCKNLKEFINVVFSR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07990 602 Gene3D - 421 602 IPR014721 -
Vivi2g07990 602 SUPERFAMILY Ribosomal protein S5 domain 2-like 392 600 IPR020568 -
Vivi2g07990 602 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 406 IPR027417 -
Vivi2g07990 602 FunFam DNA repair protein radA isogeny 430 602 - -
Vivi2g07990 602 CDD RadA_SMS_N 119 414 - -
Vivi2g07990 602 PRINTS DNA repair protein radA signature 311 335 - -
Vivi2g07990 602 PRINTS DNA repair protein radA signature 350 378 - -
Vivi2g07990 602 PRINTS DNA repair protein radA signature 464 487 - -
Vivi2g07990 602 PRINTS DNA repair protein radA signature 121 145 - -
Vivi2g07990 602 PRINTS DNA repair protein radA signature 385 411 - -
Vivi2g07990 602 PRINTS DNA repair protein radA signature 214 242 - -
Vivi2g07990 602 MobiDBLite consensus disorder prediction 29 57 - -
Vivi2g07990 602 Pfam Subunit ChlI of Mg-chelatase 485 571 - -
Vivi2g07990 602 Pfam Rubredoxin metal binding domain 119 146 IPR041166 -
Vivi2g07990 602 Pfam AAA domain 217 359 - -
Vivi2g07990 602 MobiDBLite consensus disorder prediction 69 94 - -
Vivi2g07990 602 NCBIfam DNA repair protein RadA 114 594 IPR004504 GO:0003684|GO:0005524|GO:0006281
Vivi2g07990 602 SMART AAA_5 222 381 IPR003593 GO:0016887
Vivi2g07990 602 ProSiteProfiles RecA family profile 1. 201 355 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Vivi2g07990 602 Gene3D - 211 418 IPR027417 -
Vivi2g07990 602 PANTHER DNA REPAIR PROTEIN RADA 43 601 - -
Vivi2g07990 602 FunFam DNA repair protein RadA 206 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07990 Vivi-Chr2 229873976 229887031 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07990 K04485 - gmx:100791181 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07990 2 229873976 229887031 Vivi2g07990 2 229873976 229887031 ECH
Vivi2g07990 2 229873976 229887031 Vivi7g03781 7 103708415 103714621 PCT