Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07850 ATGGAGTTGATTTCAGGTTTACCGGAAGATATAGCACGAGACTGTTTGATACGAATTTCGTACCATCAGTTTCCGGCTGTAGCGTCTGTGAGCAAAGGCTGGAAAACGGAGATTCAGATGCCGGAGTTTCGCCGGTTAAGGAAGAGTACGGGACACGCACAGAAAATCCTTGTCACGGTTCAGTCCAAGTTCGATTCAGAAAAAAATAAAACCGGTTTACTCGGAAAGGCGATGACCATGACGAACCCGGTTTATAAGCTGAGTGTATTGGAAACTGAAACCGGTGTTTGGAGCGAGTTACCATTAGGACCCGAGTTATGTGACGGGTTACCATTATTCTGTCAAATAGCTGGTGTCGGGTATGATTTAGTTGTTATGGGCGGGTGGGCTCCTGATTCGTGGAAAGCTTCGAATTCGGTTTTTATTTATAACTTTTTATCAGGTGAGTGGCGCCGTGGGGCTGATATGCCTGGTGGGCCCCGCACATTCTTTTCTTGTGCGTCGGATCAAGATCGTATGGTCTACGTGGCAGGAGGACATGATGAGGAAAAAAATGCGTTAAAGTCAGCTTTTGCTTATGACGTGGTAAATGACACGTGGATCACGCTTCCTGACATGGCAAGGGAACGAGACGAATGTAAAATTGTGTTTTGTCTTGGAACAACGGACTCCGGGAGAGTTAGGGTTGTCGGGGGATATCGTACGGAGATGCAAGGACGATTCGAGCGGAGTGCGGAGGAGTTTGATGTTGCGACGTGGAAGTGGGGTCCAGTGATGGAGGAGTTTTTAGTTGATGCAATGTGTCCGAGAACTTGCGTGGATCGTTGTGATGTGGAGGGGAGAATGTATATGTGTAAAGGTGGTGACGTGGTGGTATTGGAAAGTGACACGTGGAAGAATGTGGCGAAGGTGCCAAGTGAAATAAAAAACGTTGCGTGTATTGGAGCTTGTGATGGATCGTTGTTGTTGATTGGGTCAAGTGGGCTTGGTAAGCCTTGTATGGGATTTATATTGGGCCTAAAAAGTGGTATTTGGACTAAATTTGAAAACTCAGAAAACTTTTCTGGGCATGTTCAATCTGGTTGCCTTTTGGAGATTTAG 1101 0.4632 MELISGLPEDIARDCLIRISYHQFPAVASVSKGWKTEIQMPEFRRLRKSTGHAQKILVTVQSKFDSEKNKTGLLGKAMTMTNPVYKLSVLETETGVWSELPLGPELCDGLPLFCQIAGVGYDLVVMGGWAPDSWKASNSVFIYNFLSGEWRRGADMPGGPRTFFSCASDQDRMVYVAGGHDEEKNALKSAFAYDVVNDTWITLPDMARERDECKIVFCLGTTDSGRVRVVGGYRTEMQGRFERSAEEFDVATWKWGPVMEEFLVDAMCPRTCVDRCDVEGRMYMCKGGDVVVLESDTWKNVAKVPSEIKNVACIGACDGSLLLIGSSGLGKPCMGFILGLKSGIWTKFENSENFSGHVQSGCLLEI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07850 366 Gene3D - 31 358 IPR015915 GO:0005515
Vivi2g07850 366 CDD F-box_AtAFR-like 3 47 - -
Vivi2g07850 366 PANTHER OS02G0208700 PROTEIN 2 366 IPR044595 GO:0080037|GO:2000762
Vivi2g07850 366 SMART kelc_smart 122 170 IPR006652 GO:0005515
Vivi2g07850 366 SMART kelc_smart 173 220 IPR006652 GO:0005515
Vivi2g07850 366 Pfam Kelch motif 172 206 IPR006652 GO:0005515
Vivi2g07850 366 Pfam Kelch motif 117 157 IPR006652 GO:0005515
Vivi2g07850 366 SUPERFAMILY Kelch motif 82 327 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07850 Vivi-Chr2 227261634 227263129 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07850 - - vvo:131624957 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07850 2 227261634 227263129 Vivi2g07850 2 227261634 227263129 ECH
Vivi2g07850 2 227261634 227263129 Vivi5g00343 5 4613635 4615700 PCT