Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07848 ATGGGTGCTACTCTTCCTCCCAAAGAGGCCAACCTCTTCAAACTCATCGTGAAATCCTATGAAACCAAACAATACAAAAAGGGTCTCAAAGCAGCCGATGCTATTTTGAAAAAATATCCAGATCATGGAGAAACTTTATCGATGAAGGGTTTGACATTAAATTGCATGGATCGTAAATCTGAAGCATATGAACTGGTTCGCCAAGGATTGAAGAATGACCTTAAGAGTCATGTTTGCTGGCATGTTTATGGTCTTCTCTATCGGTCGGACAGAGAATACAGGGAAGCAATCAAGTGCTATCGAAATGCACTGAGAATAGATCCTGACAATATTGAAATCTTACGTGATCTATCTCTCTTACAGGCTCAAATGCGAGATTTATCTGGCTTTGTTGAGACGCGACAACAACTTCTGACTCTCAAGTCAAATCATCGCATGAACTGGATTGGCTTTGCTGTTTCACATCATTTGAACTCTAATGCGTCAAAAGCTATTGAAATTCTGGAAGCATATGAAGGGACATTAGAAGATGATTATCCTCCAGAAAATGAACGGATTGAGCATGGTGAAATGCTTTTATATAAGGTCTCGTTGTTAGAGGAATGTGGATTTTTTGAGAGAGCTTTTGAGGAGTTGCAGAAGAAGGAGACAAAGATTATTGATAAGCTTGGATATAAAGAACAAGAGGTTTCACTGTTAGTCAAGCTTGGTCGCTTAGAAGAAGGCGAGAAATTGTACCAGACATTGCTTTCCATGAATCCAGACAATTATAGATATTATGAAGGCCTTCAACAATGCGTAGGATTATATTCCGCAGATGGCCATTTTTCTCCTGATGAAATAGATCGATTAGATACCTTGTACAAAACACTTGGGCAGCAATTTAAGTGGTCATCTGCTGTTAAGAGAATACCACTAGATTTTCTTCAAGGTGATAGGTTTCGAGAAGCAGCTGATAGTTATATTAGACCTCTTCTAACTAAGGGAGTTCCATCTCTTTTCTCGGATCTTTCTTCTTTATACAATCACCCTGGGAAGGCAGACATTTTGGAACAAATTATTCTTGAGTTAGAGAATTCTATTAGGGCAACTGGTCAATACCCTGGGAGAGTAGAAAAAGAGCCCCCATCAACTTTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGGCGGGGTCAATATGAAACCGCACTTTCTAAAATCAACGAGGCTATAGAACATACACCTACTGTCATTGATCTATATTCTGCCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCATTGGCAGATGAAGCTAGATGTATGGATCTTGGCGATCGTTATGTTAATAGTGATTGTGTGAAGCGCATGCTGCAGGCTGATCAGATGGTTTTGGCCGAAAAAACTGCTGTGCTATTCACAAAAGATGGGGATCAACACAACAACCTCCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCTGCTGAAAGCCATTTCCGCCAAGGGGATCTTGGACTGTCTCTCAAAAAATTCTTAGCAGTGGAGAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACGTTGCGTACGTATGTGGAAATGCTTCAATTTCAAGACAGATTGCATTCACATGCATATTTTCGTAAAGCGGCTGCAGGAGCTATCAGATGTTATATAAAATTGCACGATTCTCCTCCAAAGTCATCTGACGAGGAGGATAGTGAAATGTCTAAGTTGCTTCCTGCTCAGAAAAAGAAATTAAGGCAAAAACAGAGAAAGGCAGAAGCGAGAGCTAAAAAAGAGGCAGAAGAGAAAAATGAAGAATCAAGTGCTAGTGGTATATCAAAGTCTGGGAAACGTCATACAAAACCCGTAGATCCAGATCCTCGGGGCGAAAAGTTGTTGCAGGTTGAAGATCCATTGTTGGAAGCCACAAAATACTTGAAATTGCTGCAGAAGAATTCACCTGATTCTTTGGAGACTCACTTGCTCTCCTTTGAATTATACATGAGAAAACAGAAGATTTTGCTAGCCTTCCAGGCTTTAAAGCAATTGCTGAGGTTGGATGCTGAACACCCTGATTGTCATCGCTGCTTGATTAAATTCTTCCATAAAGTGGGATCCATGAATACTCCCGTGACTGATGGTGAGAAACTCGTTTGGAGTGTTTTAGAAGCTGAGCGCCAAACTATAAGTCAGCTGCATGGAAAATCTTTACTCGAGGCAAATAATCTTTTCCTAGAAAAACATGAAGGTTCTTTGATGCATAGAGCTGCTGTTGGAGAAATGGTGTACATTTTAGATCCCAATAGAAGATCTGAGGCTGTCAAGTTGATTGAAGGGTCAACAAATAACCTTGTGTCAAGAAATGGCGCACTTGGACCAATCCCGGAGTGGAAACTTAAAGATTGTATTGCAGTTCATAAACTTCTTGGATCAGTTCTTGAGGATCAGGATGCTGCATTGAGATGGAAAGTGCGCTGTGCCGAGTTTTTCCCATACTCTACATACTTTGAGGGAAGTCAAAGCTCTGCCTCACCCAACTCTGCTCTCAGTCAAATATGCAAGGCCGCCGTAAATGGTACTTCTAGCCATTCACCGGGTGATAACGTTGTGGAACATGTTGCATCAAACGGCAAACTTGACACATTTAAAGATCTCACTATCTGA 2706 0.4095 MGATLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKYPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKSNHRMNWIGFAVSHHLNSNASKAIEILEAYEGTLEDDYPPENERIEHGEMLLYKVSLLEECGFFERAFEELQKKETKIIDKLGYKEQEVSLLVKLGRLEEGEKLYQTLLSMNPDNYRYYEGLQQCVGLYSADGHFSPDEIDRLDTLYKTLGQQFKWSSAVKRIPLDFLQGDRFREAADSYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQIILELENSIRATGQYPGRVEKEPPSTFMWTLFLLAQHYDRRGQYETALSKINEAIEHTPTVIDLYSAKSRILKHAGDLAAAAALADEARCMDLGDRYVNSDCVKRMLQADQMVLAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESHFRQGDLGLSLKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLQFQDRLHSHAYFRKAAAGAIRCYIKLHDSPPKSSDEEDSEMSKLLPAQKKKLRQKQRKAEARAKKEAEEKNEESSASGISKSGKRHTKPVDPDPRGEKLLQVEDPLLEATKYLKLLQKNSPDSLETHLLSFELYMRKQKILLAFQALKQLLRLDAEHPDCHRCLIKFFHKVGSMNTPVTDGEKLVWSVLEAERQTISQLHGKSLLEANNLFLEKHEGSLMHRAAVGEMVYILDPNRRSEAVKLIEGSTNNLVSRNGALGPIPEWKLKDCIAVHKLLGSVLEDQDAALRWKVRCAEFFPYSTYFEGSQSSASPNSALSQICKAAVNGTSSHSPGDNVVEHVASNGKLDTFKDLTI 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07848 901 FunFam N-terminal acetyltransferase A, auxiliary subunit 2 503 - -
Vivi2g07848 901 ProSiteProfiles TPR repeat profile. 380 413 IPR019734 GO:0005515
Vivi2g07848 901 PIRSF NAT_A 1 818 IPR021183 -
Vivi2g07848 901 SUPERFAMILY TPR-like 17 260 IPR011990 GO:0005515
Vivi2g07848 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 825 - -
Vivi2g07848 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Vivi2g07848 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Vivi2g07848 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Vivi2g07848 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 186 696 IPR021183 -
Vivi2g07848 901 SUPERFAMILY TPR-like 232 445 IPR011990 GO:0005515
Vivi2g07848 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Vivi2g07848 901 MobiDBLite consensus disorder prediction 606 622 - -
Vivi2g07848 901 Coils Coil 596 620 - -
Vivi2g07848 901 Gene3D - 505 725 - -
Vivi2g07848 901 MobiDBLite consensus disorder prediction 576 594 - -
Vivi2g07848 901 MobiDBLite consensus disorder prediction 631 646 - -
Vivi2g07848 901 Pfam TPR repeat 84 123 - -
Vivi2g07848 901 Gene3D - 2 503 - -
Vivi2g07848 901 MobiDBLite consensus disorder prediction 576 646 - -
Vivi2g07848 901 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 505 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07848 Vivi-Chr2 227168682 227181398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07848 K20792 - gmx:100776968 1526.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07848 2 227168682 227181398 Vivi2g07848 2 227168682 227181398 ECH
Vivi2g07848 2 227168682 227181398 Vivi5g00339 5 4522678 4536573 PCT