Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07832 ATGAAGAAACAATGTTGCAAAGAATCTGAAACAAATCAAAACCAACAACTATCATTGGATTATTGTTGTTGGTTTGAAGATGCATGCATCCTTGACATGGATTACTTTGTCAAAACTCTTTCAAACATCAAACAAAAAGGCGTTCGCGCTGATTTAATCGGTTCAATCATCACTCACTATGCTTCCAAATGGCTCCCCGATCTCGAAGCTTCAAATGCAAATGCAAATGCAAATGCTAGTTCTAATGCTAATTCGCCCGAAAGTGCGACAACATCATGGATCAAGAAAAGATTCTTTGTTGAAACCTTAATCAGTGTTCTTCCACCCGACAAAGATTCAATCCCATGCAACTTCCTTCTCCGGTTACTAAGAACGGCGAACATGGTTTCTGTCGAGGCTACTTATCGAACGGAGCTTGAGAATCGAGTTTCATGGCAGTTAGATCAAGCTTCATTGAAAGAACTCATGATACCTTCTTTTAGTCATACATGTGGAACTCTTTTGGATGTTGAGCTTGTTATTAGATTGGTTAAGAGGTTTCTGAACTTGGATCATGATGGTTCGAAAACCGGTGCTGCTTCTTTGGTTAAGGTTGCTAAGTTGGTTGATTGTTACCTTGCTGAGGTTGGTTTGGATTCTAATTTGAGTTTGTCTCAATTTGTTTCACTTGCTGCTGCTCTTCCTACTCATGCAAGAGCTACTGATGATGGTTTGTATAGAGCCATTGATACTTATCTTAAAGTGCATCCAAGTGTGTCGAAGCAAGAAAGGAAGGGACTGTGTAGACTAATTGATAGCAGGAAACTCACACCGGAAGCCTCACTTCATGCAGCACAAAACGAACGGTTACCTGTGAGAGCTGTTATTCAGGTACTTTTCACCGAGCAAACGAAACTCAATCGCCACATTGATTGGAGTACTTCTTTCAGTAGCTTGAGGAGTCCGAGTGGATATCACGGTGTGTTGGAGACACCAGAACGGTCTCTTTCAAAGCGCGAAATGAATGCGCAGCAAATGGAGATAAAGAAACTGAAGGAAGATGTTCGCAGGCTGCAGAGTCAGTGCAATGCTATGCAAGCGCAGATGGATAAGATGGCTGAGAAGAAGAAAGGTTTCTTCAAATGGAAGAAACTTGGTTTTAGTAAAAGCAACGGAGAGACGGGGAACGTTGAAATAAATGAAACTCAGACTGAATTTGGATTCGGAAGGCAAACACCTATGGACATGAAAACTAGAGTTGTTGTCAAAGGTAGGACTCCTCAAAACTGGAGAAAATCACTGTCATGA 1287 0.4134 MKKQCCKESETNQNQQLSLDYCCWFEDACILDMDYFVKTLSNIKQKGVRADLIGSIITHYASKWLPDLEASNANANANASSNANSPESATTSWIKKRFFVETLISVLPPDKDSIPCNFLLRLLRTANMVSVEATYRTELENRVSWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFLNLDHDGSKTGAASLVKVAKLVDCYLAEVGLDSNLSLSQFVSLAAALPTHARATDDGLYRAIDTYLKVHPSVSKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFTEQTKLNRHIDWSTSFSSLRSPSGYHGVLETPERSLSKREMNAQQMEIKKLKEDVRRLQSQCNAMQAQMDKMAEKKKGFFKWKKLGFSKSNGETGNVEINETQTEFGFGRQTPMDMKTRVVVKGRTPQNWRKSLS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07832 428 PANTHER OS12G0117600 PROTEIN 23 374 IPR043454 -
Vivi2g07832 428 Coils Coil 327 368 - -
Vivi2g07832 428 ProSiteProfiles NPH3 domain profile. 22 298 IPR027356 -
Vivi2g07832 428 Pfam NPH3 family 23 274 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07832 Vivi-Chr2 226519253 226521433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07832 24 364 EF-hand Containing Proteins AT3G44820 31.733 4.44e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07832 - - gmx:100777820 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07832 2 226519253 226521433 Vivi2g07832 2 226519253 226521433 ECH
Vivi2g07832 2 226519253 226521433 Vivi5g00318 5 4145217 4153670 PCT