Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07728 ATGTCTGCTGCGGTGTGCGGAACCAAGAGATCTTTCTTCGAAGACCTTCCTCCTTCACCACCTGTTTCCAAGAGGCTCCGTTGTTCCTCTTCTCCGATTCGTCTTTCTCTTCCATCGCTCGTTGATCACCTTCGCAATCTCTTTCCCAATATGGAAGATCAGATCCTTGAAAGAGCGTTGCAGGAATGCGGTAATGATTTGGATGCTGCTATTAAAAGTTTGCACGGGCTTTGTTTGGGATCTGCTGATGAAATTGCTGCAATTGCTCCTCAACCTGATGTTGTTTCCGTTGAAACAGGTGTTTTTGAAAATAATGGGGATGCATCTGCCTCAGGGAATCAGCCAGCTGAGAACAATCTTCCCGCTGATGGACCTGAATGGATTGACTTGTTTGTTAGGGAAATGTCATGTGCTACTAGTGTTGATGATGCCAGAACTCGTGCTGCGAAACTTCTTGAGGTTCTGGAGAAATCAATCAGTGCACACGCGAGTTCTGGAGCAATAACTGATCTTCAAAGGGAAAATTTGATGTTGAAATATCAAGTTGAAGTCTTGACCAAGGAGAGAAATTGTTTTAAAAGTGCTTTTAAAATCCAGCTTGAACGCCTTTCTGATTATGAAGATAAAGACCGAGAGTTGCAGCAGCTGAAGCAGTTGGTATCTCAATACCAGGAACAGATCAGAACTCTTGAGGTTAACAACTATGCTTTGCGAATGCATCTGAATCAAGCACAAAAATACAACCCTTTTCCTGGGCGTTTCCCACCCGACGGCTTCTAA 780 0.4397 MSAAVCGTKRSFFEDLPPSPPVSKRLRCSSSPIRLSLPSLVDHLRNLFPNMEDQILERALQECGNDLDAAIKSLHGLCLGSADEIAAIAPQPDVVSVETGVFENNGDASASGNQPAENNLPADGPEWIDLFVREMSCATSVDDARTRAAKLLEVLEKSISAHASSGAITDLQRENLMLKYQVEVLTKERNCFKSAFKIQLERLSDYEDKDRELQQLKQLVSQYQEQIRTLEVNNYALRMHLNQAQKYNPFPGRFPPDGF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07728 259 CDD CUE 39 74 - -
Vivi2g07728 259 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Vivi2g07728 259 SUPERFAMILY UBA-like 38 80 IPR009060 GO:0005515
Vivi2g07728 259 Pfam CUE domain 39 73 IPR003892 GO:0043130
Vivi2g07728 259 Coils Coil 206 233 - -
Vivi2g07728 259 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 258 - -
Vivi2g07728 259 Gene3D - 38 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07728 Vivi-Chr2 225011294 225014761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07728 - - gmx:100815998 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07728 2 225011294 225014761 Vivi2g07728 2 225011294 225014761 ECH
Vivi2g07728 2 225011294 225014761 Vivi5g00237 5 2876076 2880770 PCT