Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06839 ATGCCTGCAAATACAATGGCTGCTACTACTCAACTTGGAGTTTCATCATATCTCACAACCTCACTTTCTTGTCGCAATTCTTGGACTTTCACTAATCAATCAAGGTTCTTATCACTTCAAAACTCAAATTCAAGGATTATACTTGGTAATTTATCGATCAAGTCTATTGCTTTTAAAGATAAGGACCATAAGTTGCAATCTTTACAAAAAGATGACAAGAACAGAAGTTTGGAGCAAGTCAAAAGAAGAAGCCGGGAAGCATTGTTAAACTCGAGAGATCCTGTTGAAACAATGAAGATGATTGACTCAATCCAAGGGTTAGGAATTAGCCATCATTTGGAAGATGAGATCAATATGCAACTTGAAAGGATACGTGATTGGGATGCTTCTAGAAACCTCTTTGCTACATCCCTTAAATTTCGTTTACTTAGGCATAATGGTTGGCCTACATGTTCTGACATATTTAGAACATTTTTAGACAAGAGTGATGGTGATTTCAAAGAGTCACTCACCAAAGATATTCATGGTATGATGAGCCTATATGAGGCATCATATTTAGGAACAGAAGATGAAGAAATATTAAAGCGAGCATTGAAATTTTCAAGGACTCGCTTAAACGAGTTAATCCCACACCTTAGTAGTGAGGTTGGTAAACACATTGATAGAGCTTTAACACTTCCAAAGCACCTAAGAATGGCAAGGTTAGAAGCTAAAAATTACATGGATGAATATAGCCAAACGAATAACCAAATACCAGCTCTTACGGAATTGGCAAAGTTAGACTTTGATATGACTCAATCACTACATCGAAGAGAATTAGCAGAAATATGCAGGTGGTGGAAAGAGTTGGGACTTATAGACAAACTAAGCTTTGCAAGAGATAGACCAACAGAGTGCTTCTTATGGACAGTGGGAACTTTTCCAGAACCATGTTATACAAATTGTCGTATTGAACTTACAAAAACCATATGCATTTTGGATGTTATTGACGAAATCTTTGACAATTATGGAACATTAGATGAACTTATTCTTTTCACAAATTCAATCAAAAGGTGGGACCTTGATTCAATGGAGCAACTTCCTCAGTATATGAAGATATCCTATATGGCATTATATAACACCACAAATGAAATTTCATATAGAATTCTGAAAGAACATGGGCTAACTGTTGTTTCTTACTTAAAAAAAACATGGATGGACATGTTTGATGCATATTTGGAAGAAGCGAAATGGTTCAATAATGGATATCTGCCAAGTTTTAGGACATATTTGGATAATGGAGCAATTTCTGTTGGATCATGTATGGCTATGGTGCATGCTGCTTTCCTCATTGGTGATGGTCTATCCAAGGAAACCATTTCCATGATGAGACCGTATCCTAGACTCTTCACTTGCGCCGGAGAAATTCTTAGGCTATGGGATGACTTAGGAACTTCAACGGAGGAACAAGAAAGAGGGGATAATGCTAGCAGCATACAATGCTTGATGGGAGAGAATAATATTAGAGATGAAAATGAAGGAAGGAAACATATAAGGCTGTTCATAGGGAACTTGTGGCGAGAACTCAATGGCCTTGCCATGACCAAAACGTTGCCCATATCTGTTGTCAAAGCTTCTCTTAACATGGCTAGAACTGCTCAAGTTATTTATCAACATGGAGATGATAAAAGCACTTTTACTGTTGATGATTATGTCCAAACATTGATCTTCACATCATTGCCTACTAGCCATTGA 1734 0.3702 MPANTMAATTQLGVSSYLTTSLSCRNSWTFTNQSRFLSLQNSNSRIILGNLSIKSIAFKDKDHKLQSLQKDDKNRSLEQVKRRSREALLNSRDPVETMKMIDSIQGLGISHHLEDEINMQLERIRDWDASRNLFATSLKFRLLRHNGWPTCSDIFRTFLDKSDGDFKESLTKDIHGMMSLYEASYLGTEDEEILKRALKFSRTRLNELIPHLSSEVGKHIDRALTLPKHLRMARLEAKNYMDEYSQTNNQIPALTELAKLDFDMTQSLHRRELAEICRWWKELGLIDKLSFARDRPTECFLWTVGTFPEPCYTNCRIELTKTICILDVIDEIFDNYGTLDELILFTNSIKRWDLDSMEQLPQYMKISYMALYNTTNEISYRILKEHGLTVVSYLKKTWMDMFDAYLEEAKWFNNGYLPSFRTYLDNGAISVGSCMAMVHAAFLIGDGLSKETISMMRPYPRLFTCAGEILRLWDDLGTSTEEQERGDNASSIQCLMGENNIRDENEGRKHIRLFIGNLWRELNGLAMTKTLPISVVKASLNMARTAQVIYQHGDDKSTFTVDDYVQTLIFTSLPTSH 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06839 577 FunFam Isoprene synthase, chloroplastic 225 564 - -
Vivi2g06839 577 PANTHER OS04G0344100 PROTEIN-RELATED 75 556 - -
Vivi2g06839 577 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 71 248 IPR008930 -
Vivi2g06839 577 Coils Coil 230 250 - -
Vivi2g06839 577 SFLD Isoprenoid Synthase Type I 253 571 - -
Vivi2g06839 577 SUPERFAMILY Terpenoid synthases 252 558 IPR008949 -
Vivi2g06839 577 Gene3D Farnesyl Diphosphate Synthase 67 558 IPR008949 -
Vivi2g06839 577 CDD Terpene_cyclase_plant_C1 62 570 IPR044814 GO:0010333|GO:0016102
Vivi2g06839 577 Gene3D - 92 250 IPR036965 GO:0010333|GO:0016829
Vivi2g06839 577 Pfam Terpene synthase family, metal binding domain 256 521 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vivi2g06839 577 Pfam Terpene synthase, N-terminal domain 63 224 IPR001906 GO:0010333|GO:0016829
Vivi2g06839 577 SFLD Terpene Cyclase Like 1 C Terminal Domain 253 571 IPR034741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06839 Vivi-Chr2 207753762 207756168 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06839 - - gmx:100807904 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06839 2 207753762 207756168 Vivi2g06839 2 207753762 207756168 ECH
Vivi2g06839 2 207753762 207756168 Vivi5g01828 5 67598242 67604200 PCT