Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06349 ATGACCCAAGTTCTCCACTCTCCACCTCATTTTGCTTCATCACAAAGATCACCCTCAACTTCAACCTCTTCTTCTCCTCTTTCTTCCTTCTCTTGCCATGCCATTTTTCAACCTCCCTCTCACCCACATTTCCCACTTTTTGAACTTCTAGTTACTCTTTTCAGAAAATCATTATTTTCTTTCAAGAATACTGTCACCAAGGACATCTCCATCATGGACATAAGTCCTCCGACCAACGTGCGTCATGTCGCGCACGTTACTTTCGATAGGTTCAATGGTTTCTTAGGCTTGCCTGATGAGTTTGAACCTGAATTCCCCAGAAGACCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCGACGGAATCAATGCAGTTATCTTATGATTCAAGAGGGAATAGTGTGCCAACAATTCTTCTGTTAATGCAAAGGCATCTCTATGTTCAAGGAGGATTGCAGGTGGAAGGGATTTTCAGAATCAATGCAGACAATACTCAAGAGGAACATGTTAGGAATCAATTGAACTTGGGATTGGTTCCTGAAGACATCGATGTACATTGTTTGGCAGGACTAATTAAGGCTTGGTTCCGGGAACTTCCTACGGGAGTTCTAGATCCATTATCACAAGAGCAGGTAATGCAATGCCAAACTGAGGAAGAGTGTGTTGAACTAGTTAAGCATCTACCTCATACCGAATCTACACTCTTGGATTGGGCCATCAATCTAATGGTCGATGTCGTCCAACATGAAAATCTCAATAAGATGAACGCGCGCAACATTGCCATGGTTTTCGCACCAAACATGACTCAGATGGCGGATCCATTCACTGCATTGATGTATGCGGTTCAAGTGATGAACTTTTTAAAGATGCTTATATTGAGGACATTACGCGAAAGAAACGATTCGGTGGTGGAACCGAATCCTAGATTAAATTTAGAGCCTTCTGATGAGAACGAACAGCGTGGACTTTTCAAGTTGTGTCAGAAAGAAGATACTGCAGCAGTAGACAATGAAGAGGCTAAGGAAAAATTTGTCTCAGAAAAATCTGTCTTAGAATGTTCACCTGAATCATCATCACTCGATAAGAACTCCTCGACTGGAGGAGAATCTGGTACGTTGATAAGCACTTCTGAGAATCCGATTTGCAATGAGGATTTGTATTGTGAGTTTCCGCCGAAAAAAAACATGGGAAAGAACAACAAGTCTGGTCAATCAGGTAGTTCAAATGCTAAAAAAGGGTCTAAAAAGACAAGAGGACAGCAACCTGTGACCAACGGAAAAGTATCAGTCGAGAAAAAGGGAACAAAGACTTTGAGCAATACTGATACAAGATCTGACCGAGTTGAATCTTGGCGATGA 1359 0.4187 MTQVLHSPPHFASSQRSPSTSTSSSPLSSFSCHAIFQPPSHPHFPLFELLVTLFRKSLFSFKNTVTKDISIMDISPPTNVRHVAHVTFDRFNGFLGLPDEFEPEFPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQGGLQVEGIFRINADNTQEEHVRNQLNLGLVPEDIDVHCLAGLIKAWFRELPTGVLDPLSQEQVMQCQTEEECVELVKHLPHTESTLLDWAINLMVDVVQHENLNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLKMLILRTLRERNDSVVEPNPRLNLEPSDENEQRGLFKLCQKEDTAAVDNEEAKEKFVSEKSVLECSPESSSLDKNSSTGGESGTLISTSENPICNEDLYCEFPPKKNMGKNNKSGQSGSSNAKKGSKKTRGQQPVTNGKVSVEKKGTKTLSNTDTRSDRVESWR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06349 452 MobiDBLite consensus disorder prediction 437 452 - -
Vivi2g06349 452 MobiDBLite consensus disorder prediction 338 452 - -
Vivi2g06349 452 MobiDBLite consensus disorder prediction 351 382 - -
Vivi2g06349 452 SMART RhoGAP_3 133 296 IPR000198 GO:0007165
Vivi2g06349 452 MobiDBLite consensus disorder prediction 397 436 - -
Vivi2g06349 452 CDD CRIB 72 112 - -
Vivi2g06349 452 MobiDBLite consensus disorder prediction 1 24 - -
Vivi2g06349 452 CDD RhoGAP 136 292 - -
Vivi2g06349 452 Pfam RhoGAP domain 136 270 IPR000198 GO:0007165
Vivi2g06349 452 ProSiteProfiles CRIB domain profile. 74 87 IPR000095 -
Vivi2g06349 452 ProSiteProfiles Rho GTPase-activating proteins domain profile. 119 304 IPR000198 GO:0007165
Vivi2g06349 452 Pfam P21-Rho-binding domain 73 105 IPR000095 -
Vivi2g06349 452 Gene3D Rho GTPase activation protein 107 302 IPR008936 -
Vivi2g06349 452 PANTHER MKIAA1688 PROTEIN 28 393 IPR044785 GO:0005096
Vivi2g06349 452 FunFam Rho GTPase-activating protein 5 104 297 - -
Vivi2g06349 452 SUPERFAMILY GTPase activation domain, GAP 114 293 IPR008936 -
Vivi2g06349 452 SMART PBD_5 74 108 IPR000095 -
Vivi2g06349 452 Gene3D CRIB domain 70 104 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06349 Vivi-Chr2 198677444 198679793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06349 - K20642 gmx:100784019 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06349 2 198677444 198679793 Vivi5g02165 5 89946875 89948321 PCT