Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05663 ATGAGTAACGTCACTGAGAAATTGGGGATCAAGATTGAAACAAACCCTTCTGAAGAAAAACTCACTCAACTTGGTGTTAGGCAATGGTCCAAATGGGGTTGTCCTCCAAGCAAATTTCTCTCCACTTTTGATTCGAAAGAGACTTGCTATCTCCTAGAAGGAAAAGTTAAGGTAACACCAAGTGGAGCAAATGAGTCAGTTGAATTGGGTGCTGGTGATTTGGTTGTGTTTCCTAAAGGCATGACTTGTACTTTTGATGTTTCTGTTGCTGTCAACAAGCACTTTATCTTTGAATAA 297 0.3973 MSNVTEKLGIKIETNPSEEKLTQLGVRQWSKWGCPPSKFLSTFDSKETCYLLEGKVKVTPSGANESVELGAGDLVVFPKGMTCTFDVSVAVNKHFIFE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05663 98 Gene3D Jelly Rolls 1 97 IPR014710 -
Vivi2g05663 98 PANTHER OS04G0445200 PROTEIN 2 98 - -
Vivi2g05663 98 CDD cupin_TM1112-like 29 97 - -
Vivi2g05663 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
Vivi2g05663 98 SUPERFAMILY RmlC-like cupins 21 96 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05663 Vivi-Chr2 184943340 184945216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05663 K06995 - gmx:100527331 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05663 2 184943340 184945216 Vivi2g05663 2 184943340 184945216 ECH
Vivi2g05663 2 184943340 184945216 Vivi1g06078 1 135420744 135421422 PCT