Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g05644 ATGGCCCTCGAAACTTTACTCTCAAGACTCAAAACCGCATTTTCACACAGCTTCGACTCAGTTCGACCCTCTAACAAAACGACACACTCGTCCATCTCAAACCCAAAACGCATCGCCGTTTTAGCCTTCGAAGTCGCCGGAGTGATGTCGAAGCTTCTACATCTCTGGCAATCCCTCTCCGACGCAAACATTGTTCGTCTTCAAAACGACGTCGTTTCACTCGAAGGCGTTTTGAAATTAGTCACAAACGACAAGCCGTTTCTCATCAAACTCGCCGCTGCTGAGTTTGCCGACTCGCTCCGACTCGTTGCTGACTCGGTCTCTCGACTCAGTATGAACTGCAGTAACTCCACACTCAGATCCTTCCACCGAGTTTTCACTGAGTTCGCTGACTCGGGCTTCGACTCACTCTGTTGGACTCTCACAACCCTAAAAGAAATTGAATCCAAACACAGAAGAATGGAACGTTACGTGTCCCTCACGTTAACTCTTCATAAAGAAATCGACGAGCTTTCACTTTTACAAAGCGCGTTGAGAAAAGCACTTCTGAACAACAACAGCAGCAACAAAAACAGCAAAGCCAAAATCAGTGACCTTGAACAAAAGATTTTCTGGCAGAAACAAGAGGTAAAGAATCTCAAAGAAAAATCATTATGGAACAAAGGTTTTGATAATGTTGTTCTGTTATTAACTAGGTTTGTCTTCACTTTGTTAGCAAGAATTAAGGTTGTTTTTGGAATTGGAAATGGACACAATTTACCTTATTTATCGCGAAGTTTATCAGCTTCTGCTGTTGTTTATCCTTCTGATCATCAAAAAGTTGAAAGCTTTGTATCTGGGCCATTGAAAAGTTTCAATCTTGATGAGAGAAATGTGGATATTGTAAATGGGTTCTTTGAGTCAAATTGTGAAGTTTTGAAACCACCACAAGGTAGTTTAGGTGATTCAGCTTTATCATTACATTATGCTAATCTGATTATTGTAATGGAAAAGATGATTAAATCACCTCAATTAGTTGGTGTTGATGCAAGAGATGATTTATATACTATGTTACCGAATAGTATAAGATCGTCGTTGAGATTAAGGTTAAAAGGGTCGATTGGATTTTGTGCTTGTGATCCTTTATTGGCTTCTGAATGGAGAAATGCTTTGGGAAGGATACTCTGTTGGTTGTTACCTTTGGCACAAAACATGATTAGGTGGCAAAGTGAAAGGAGTCTTGAAGAGAAGAGTTTGGTTCCTAAGAAATCGAATGTGTTGCTTTTGCAAACTTTGTTTTTTGCTGATAAGGTGAAGACAGAAGCTGCTATAACCGAGTTGCTTGTTGGTTTGAATTATATTTGGAAGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGCAACAATGATTTCAATGGGTTTTTGAGTTTGAACAAACCTAAATAA 1431 0.3962 MALETLLSRLKTAFSHSFDSVRPSNKTTHSSISNPKRIAVLAFEVAGVMSKLLHLWQSLSDANIVRLQNDVVSLEGVLKLVTNDKPFLIKLAAAEFADSLRLVADSVSRLSMNCSNSTLRSFHRVFTEFADSGFDSLCWTLTTLKEIESKHRRMERYVSLTLTLHKEIDELSLLQSALRKALLNNNSSNKNSKAKISDLEQKIFWQKQEVKNLKEKSLWNKGFDNVVLLLTRFVFTLLARIKVVFGIGNGHNLPYLSRSLSASAVVYPSDHQKVESFVSGPLKSFNLDERNVDIVNGFFESNCEVLKPPQGSLGDSALSLHYANLIIVMEKMIKSPQLVGVDARDDLYTMLPNSIRSSLRLRLKGSIGFCACDPLLASEWRNALGRILCWLLPLAQNMIRWQSERSLEEKSLVPKKSNVLLLQTLFFADKVKTEAAITELLVGLNYIWKFEREMTAKALFECNNDFNGFLSLNKPK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g05644 476 PANTHER BNAC09G50660D PROTEIN 32 463 - -
Vivi2g05644 476 Pfam Protein of unknown function (DUF668) 313 400 IPR007700 GO:0045927
Vivi2g05644 476 Coils Coil 196 216 - -
Vivi2g05644 476 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g05644 Vivi-Chr2 184582740 184584722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g05644 - - mtr:25497139 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g05644 2 184582740 184584722 Vivi2g05644 2 184582740 184584722 ECH
Vivi2g05644 2 184582740 184584722 Vivi1g06095 1 135691419 135693419 PCT