Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06095 ATGGCTCTTGAAACACTCCTCTTCAAGGTCAAAACCGCCATTTCAAACAGCTTCGATTCCGTTCCACCCAAGCTTCTCAAGAAGAAAATTACTTCTTCTACTTCATTCAAGAACTCGAAACGAAACGTCGCCGTTTTAGCCTTCGAGATCGCGGGTGTTATGTCGAAGCTTCTTCATCTTTATCACTCTCTCTCCGATGCTACCATAGTTCGCATCCGAAACGACGCCGTTACGCTTGAGGGTGTTCGGAAGATTATCTCTAATGATGAATCGTTCTTGCTCGGACTCGCTTGCGCTGAGTTTACAGAGGCTCTACGAGTCGTTGCTAACTCGGTTACCCGACTCAGTCAACGCTGCGAGGATCATAATCTTCGGGATTTTCACCGGGCGTTTCTCGAGTTTGCTGATTCGGGCCGTGATACAAACGGGTGGGTCCTATCTGGCCCGAAGGAAATTGAAGCTAAGTTCAGGAAAATGGAACGTTACGTGATGCTTACGGCAGCTTTGCACCGTGAAATGGAGGAGCTTTCTGTTTTGGAAAGTGGGTTCAGAAAAGCTTTGAATTTGAATCATCATCATCATCATCGGCGTAATAGTAGCAGTGAAGTGAATGAAGGTTCTTTGGGTGTTGGGAAAGAGCAGAAAATCTATGAACTTCAGCAGAAGATTTGTTGGCAGAAACAAGAGGTGAAGGATCTGAAAGATAGGTGTTTGTGGAGTAGAAGTTTCGATGGGGTTGTTTTATTACTTGTGAGGTTTTGTTTCACTGTTTTAGCTAGGATTAAGGTTGTTTTTGGGATTGGTCATTCTGTTCCTTGTTTGTCACCTAGTTTGTCAACTTCTGCAACAGTTTATCCCTCTGATCAGAATTCCAATTCTTGTCATGAATTTGTTTCTGGGTCATTGGAAATCTCAGAGCTTGAAGAGATCAAAGAACGTTTCGGAAGTGGGTTTTTTGAGTCTAACTCCAAGCTTTTGAAACCACCTCCTAGTACTTTAGGTGCTTCAGCTTTGGCTTTACACTATGCTAACTTGATCATAGTGTTGGAGAAGATGATAAAGACACCTCATTTGATTGGTTTGGATGCAAGGGATGATTTGTATGGCATGTTACCTAGCAGCATAAGGTCAGGTTTGAGGACCAGGTTGAAAGGAATTGGGTTCTGTGCAAGTGATCCTGTTCTTGCTGGTGAATGGAAGGATGCTTTGGGGAGGATATTAGGGTGGTTATCACCTTTGGCACATAACATGATCAAGTGGCAGAGTGAAAGAAGCTTTGAGCAGCATAATTTGGTGCCTAAGACTAATGTTTTGCTTCTGCAGACTTTGTTTTTTGCAAACAAACAGAAGACTGAGGCTGCAATAACTGAGTTGCTTGTTGGGTTGAACTATATTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCTTTGTTTGAATGTGCTAATTTCAATGGTTTTATTAAATCTGCAAAAACATAG 1479 0.4266 MALETLLFKVKTAISNSFDSVPPKLLKKKITSSTSFKNSKRNVAVLAFEIAGVMSKLLHLYHSLSDATIVRIRNDAVTLEGVRKIISNDESFLLGLACAEFTEALRVVANSVTRLSQRCEDHNLRDFHRAFLEFADSGRDTNGWVLSGPKEIEAKFRKMERYVMLTAALHREMEELSVLESGFRKALNLNHHHHHRRNSSSEVNEGSLGVGKEQKIYELQQKICWQKQEVKDLKDRCLWSRSFDGVVLLLVRFCFTVLARIKVVFGIGHSVPCLSPSLSTSATVYPSDQNSNSCHEFVSGSLEISELEEIKERFGSGFFESNSKLLKPPPSTLGASALALHYANLIIVLEKMIKTPHLIGLDARDDLYGMLPSSIRSGLRTRLKGIGFCASDPVLAGEWKDALGRILGWLSPLAHNMIKWQSERSFEQHNLVPKTNVLLLQTLFFANKQKTEAAITELLVGLNYIWRFEREMTAKALFECANFNGFIKSAKT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06095 492 Pfam Domain of unknown function (DUF3475) 45 100 IPR021864 GO:0045927
Vivi1g06095 492 Pfam Protein of unknown function (DUF668) 332 419 IPR007700 GO:0045927
Vivi1g06095 492 PANTHER BNAC09G50660D PROTEIN 37 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06095 Vivi-Chr1 135691419 135693419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06095 - - vvo:131644267 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06095 1 135691419 135693419 Vivi1g06095 1 135691419 135693419 ECH
Vivi2g05644 2 184582740 184584722 Vivi1g06095 1 135691419 135693419 PCT